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  • SUMMARY

  • TISSUE

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  • APBA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:29.5 nTPM
HPA Brain:96.7 nTPM
GTEx:29.5 nTPM
Pig:36.9 nTPM
Mouse:58.7 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 79.8
2226 Male, age 75, left hemisphere 81.9
1961 Female, age 42, unknown 77.7
Dorsomedial nucleus
nTPM: 75.1
1989 Male, age 62, unknown 92.9
2041 Female, age 72, unknown 73.9
2017 Female, age 42, unknown 58.6
Lateral hypothalamic area
nTPM: 96.7
2271 Male, age 75, both hemispheres 105.3
2228 Male, age 66, unknown 102.7
1791 Male, age 80, right hemisphere 101.9
2412 Male, age 62, unknown 76.7
Mammillary body
nTPM: 75.1
1923 Female, age 72, unknown 98.7
2413 Male, age 66, unknown 85.4
1948 Female, age 72, unknown 69.5
1834 Female, age 42, unknown 66.2
1945 Male, age 80, right hemisphere 55.6
Paraventricular nucleus
nTPM: 62.8
2700 Male, age 62, unknown 62.8
Preoptic area
nTPM: 73.7
1907 Male, age 80, right hemisphere 93.0
2414 Female, age 72, unknown 65.8
1861 Female, age 42, unknown 62.2
Supraoptic nucleus
nTPM: 50.5
2835 Female, age 72, unknown 68.9
1894 Female, age 72, unknown 43.7
2043 Male, age 62, unknown 38.9
Ventromedial nucleus
nTPM: 76.3
1982 Female, age 72, unknown 80.6
1822 Female, age 42, unknown 72.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 29.5
Samples: 257

Max nTPM: 115.7
Min nTPM: 5.7
Std nTPM: 12.9
Median nTPM: 28.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 115.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 69.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 62.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 61.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 57.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 55.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 55.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 54.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 54.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 53.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 53.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 52.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 50.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 48.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 48.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 47.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 47.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 47.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 47.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 45.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 45.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 44.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 44.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 44.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 44.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 44.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 43.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 43.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 43.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 43.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 43.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 43.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 43.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 43.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 42.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 41.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 40.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 40.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 40.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 40.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 39.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 39.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 39.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 39.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 39.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 39.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 38.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 38.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 38.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 38.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 38.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 37.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 37.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 37.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 37.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 37.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 37.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 37.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 36.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 36.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 36.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 36.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 36.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 36.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 36.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 36.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 36.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 35.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 35.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 35.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 35.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 35.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 35.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 35.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 35.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 34.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 34.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 34.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 34.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 34.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 33.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 33.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 33.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 33.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 33.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 33.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 33.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 32.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 32.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 32.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 32.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 32.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 32.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 32.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 31.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 31.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 31.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 31.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 31.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 31.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 30.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 30.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 30.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 30.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 30.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 30.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 30.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 29.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 29.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 29.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 29.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 29.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 28.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 28.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 28.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 28.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 27.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 27.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 27.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 27.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 26.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 26.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 26.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 26.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 26.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 26.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 25.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 25.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 25.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 25.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 25.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 25.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 25.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 24.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 24.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 24.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 24.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 24.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 24.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 24.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 24.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 24.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 24.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 24.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 24.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 23.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 23.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 23.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 23.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 23.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 23.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 23.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 23.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 22.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 22.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 22.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 22.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 22.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 22.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 21.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 21.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 21.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 21.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 21.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 20.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 20.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 20.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 20.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 20.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 20.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 20.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 20.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 20.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 19.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 19.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 19.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 19.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 19.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 19.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 19.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 19.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 19.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 18.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 18.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 18.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 18.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 18.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 18.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 18.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 17.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 17.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 17.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 17.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 17.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 17.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 17.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 17.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 17.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 17.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 17.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 17.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 17.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 17.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 16.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 15.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 15.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 14.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 14.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 14.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 13.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 13.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 13.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 13.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 13.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 13.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 12.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 12.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 12.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 12.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 11.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 11.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 11.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 10.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 10.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 9.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 9.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 8.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 8.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 8.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 7.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 6.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 6.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 6.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 5.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 36.9
Samples: 4

Max nTPM: 45.0
Min nTPM: 32.5
Sample A Female 45.0
Sample B Female 37.0
Sample C Male 33.1
Sample D Male 32.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 58.7
Samples: 4

Max nTPM: 62.0
Min nTPM: 54.5
Sample A Male 59.0
Sample B Male 54.5
Sample C Female 62.0
Sample D Female 59.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
74658000 Antisense, RP_060220_04_C01, Mouse strain C57BL/6J (56 days, male) 2.3
77869854 Antisense, RP_070212_03_A07, Mouse strain C57BL/6J (56 days, male) 1.8
69526713 Antisense, RP_050421_01_E03, Mouse strain C57BL/6J (56 days, male) 1.5

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