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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.6
nTPM
Monaco:
164.9
nTPM
Schmiedel:
71.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.6
HPA sample
nTPM
gdT-cell nTPM: 40.1
Samples: 6
Max nTPM: 60.5
Min nTPM: 29.3
P10809_1007
36.1
P10809_1022
60.5
P10809_1041
42.3
P10809_1060
29.3
P10809_1077
35.7
P10809_1098
36.8
MAIT T-cell nTPM: 40.6
Samples: 6
Max nTPM: 51.6
Min nTPM: 33.1
P10809_1006
44.7
P10809_1024
51.6
P10809_1043
37.9
P10809_1062
36.2
P10809_1083
33.1
P10809_1097
40.3
Memory CD4 T-cell nTPM: 36.0
Samples: 6
Max nTPM: 42.1
Min nTPM: 30.7
P10809_1014
40.2
P10809_1026
33.4
P10809_1045
38.2
P10809_1064
30.7
P10809_1086
42.1
P10809_1113
31.1
Memory CD8 T-cell nTPM: 38.8
Samples: 5
Max nTPM: 42.4
Min nTPM: 35.2
P10809_1012
39.7
P10809_1027
35.2
P10809_1046
41.3
P10809_1065
35.4
P10809_1111
42.4
Naive CD4 T-cell nTPM: 36.8
Samples: 6
Max nTPM: 48.1
Min nTPM: 30.8
P10809_1015
48.1
P10809_1030
35.6
P10809_1049
30.8
P10809_1068
35.2
P10809_1085
32.6
P10809_1112
38.4
Naive CD8 T-cell nTPM: 40.6
Samples: 6
Max nTPM: 51.6
Min nTPM: 32.3
P10809_1016
38.7
P10809_1031
51.6
P10809_1050
32.3
P10809_1069
43.7
P10809_1087
44.6
P10809_1110
32.5
T-reg nTPM: 38.3
Samples: 6
Max nTPM: 50.1
Min nTPM: 27.6
P10809_1018
50.1
P10809_1037
43.3
P10809_1056
34.5
P10809_1075
27.6
P10809_1094
41.9
P10809_1106
32.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.2
Samples: 4
Max nTPM: 116.9
Min nTPM: 87.7
RHH5202_R3573
112.7
RHH5230_R3602
107.4
RHH5259_R3631
116.9
RHH5288_R3660
87.7
Effector memory CD8 T-cell nTPM: 147.6
Samples: 4
Max nTPM: 179.8
Min nTPM: 117.9
RHH5203_R3574
117.9
RHH5231_R3603
150.1
RHH5260_R3632
142.4
RHH5289_R3661
179.8
MAIT T-cell nTPM: 116.1
Samples: 4
Max nTPM: 135.4
Min nTPM: 87.2
RHH5233_R3605
115.0
RHH5205_R3576
135.4
RHH5262_R3634
126.6
RHH5297_R3663
87.2
Memory CD4 T-cell TFH nTPM: 94.7
Samples: 4
Max nTPM: 120.1
Min nTPM: 76.3
RHH5300_R3666
96.3
RHH5236_R3608
76.3
RHH5265_R3637
86.2
RHH5208_R3579
120.1
Memory CD4 T-cell Th1 nTPM: 105.0
Samples: 4
Max nTPM: 115.7
Min nTPM: 95.4
RHH5210_R3581
106.5
RHH5302_R3668
95.4
RHH5238_R3610
102.2
RHH5267_R3639
115.7
Memory CD4 T-cell Th1/Th17 nTPM: 107.0
Samples: 4
Max nTPM: 122.0
Min nTPM: 92.4
RHH5303_R3669
109.9
RHH5211_R3582
103.6
RHH5239_R3611
122.0
RHH5268_R3640
92.4
Memory CD4 T-cell Th17 nTPM: 132.6
Samples: 4
Max nTPM: 173.2
Min nTPM: 116.4
RHH5304_R3670
120.9
RHH5212_R3583
116.4
RHH5240_R3612
173.2
RHH5269_R3641
119.9
Memory CD4 T-cell Th2 nTPM: 116.1
Samples: 4
Max nTPM: 127.1
Min nTPM: 100.1
RHH5305_R3671
127.1
RHH5213_R3584
122.6
RHH5241_R3613
114.4
RHH5270_R3642
100.1
Naive CD4 T-cell nTPM: 121.6
Samples: 4
Max nTPM: 158.6
Min nTPM: 100.3
RHH5306_R3672
107.9
RHH5214_R3585
100.3
RHH5242_R3614
158.6
RHH5271_R3643
119.5
Naive CD8 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 126.8
Min nTPM: 91.9
RHH5201_R3572
94.1
RHH5229_R3601
126.8
RHH5258_R3630
91.9
RHH5287_R3659
111.5
Non-Vd2 gdTCR nTPM: 154.5
Samples: 4
Max nTPM: 187.9
Min nTPM: 133.2
RHH5235_R3607
159.0
RHH5264_R3636
137.9
RHH5207_R3578
187.9
RHH5299_R3665
133.2
T-reg nTPM: 91.3
Samples: 4
Max nTPM: 97.9
Min nTPM: 86.6
RHH5301_R3667
86.9
RHH5237_R3609
97.9
RHH5266_R3638
86.6
RHH5209_R3580
93.9
Terminal effector memory CD4 T-cell nTPM: 164.9
Samples: 2
Max nTPM: 167.5
Min nTPM: 162.3
RHH5243_R3615
167.5
RHH5272_R3644
162.3
Terminal effector memory CD8 T-cell nTPM: 159.0
Samples: 4
Max nTPM: 203.2
Min nTPM: 115.3
RHH5232_R3604
174.8
RHH5204_R3575
115.3
RHH5261_R3633
203.2
RHH5296_R3662
142.7
Vd2 gdTCR nTPM: 115.1
Samples: 4
Max nTPM: 132.1
Min nTPM: 86.7
RHH5234_R3606
112.9
RHH5206_R3577
132.1
RHH5263_R3635
128.6
RHH5298_R3664
86.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.