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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:47.1 nTPM
HPA Brain:100.0 nTPM
GTEx:47.1 nTPM
Pig:56.0 nTPM
Mouse:32.7 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 58.6
1961 Female, age 42, unknown 69.9
2226 Male, age 75, left hemisphere 47.2
Dorsomedial nucleus
nTPM: 75.4
2041 Female, age 72, unknown 79.6
2017 Female, age 42, unknown 79.0
1989 Male, age 62, unknown 67.5
Lateral hypothalamic area
nTPM: 73.4
2412 Male, age 62, unknown 85.2
1791 Male, age 80, right hemisphere 75.1
2228 Male, age 66, unknown 68.0
2271 Male, age 75, both hemispheres 65.5
Mammillary body
nTPM: 75.3
1834 Female, age 42, unknown 90.1
1945 Male, age 80, right hemisphere 83.8
1948 Female, age 72, unknown 78.6
2413 Male, age 66, unknown 65.6
1923 Female, age 72, unknown 58.6
Paraventricular nucleus
nTPM: 100.0
2700 Male, age 62, unknown 100.0
Preoptic area
nTPM: 76.7
2414 Female, age 72, unknown 84.3
1861 Female, age 42, unknown 84.1
1907 Male, age 80, right hemisphere 61.5
Supraoptic nucleus
nTPM: 89.5
2043 Male, age 62, unknown 98.8
1894 Female, age 72, unknown 87.2
2835 Female, age 72, unknown 82.7
Ventromedial nucleus
nTPM: 67.0
1822 Female, age 42, unknown 70.1
1982 Female, age 72, unknown 64.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 47.1
Samples: 257

Max nTPM: 163.3
Min nTPM: 5.4
Std nTPM: 22.0
Median nTPM: 40.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 163.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 156.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 142.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 125.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 122.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 118.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 118.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 117.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 113.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 110.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 107.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 101.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 100.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 96.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 91.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 79.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 78.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 77.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 75.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 73.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 73.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 72.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 69.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 67.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 67.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 66.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 65.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 62.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 62.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 61.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 61.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 61.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 61.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 61.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 61.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 61.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 60.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 60.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 59.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 59.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 59.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 59.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 59.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 58.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 57.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 56.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 56.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 56.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 56.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 55.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 55.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 55.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 55.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 55.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 55.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 55.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 54.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 54.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 54.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 53.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 53.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 53.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 53.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 52.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 52.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 52.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 51.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 51.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 51.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 51.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 51.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 51.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 51.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 49.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 49.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 49.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 49.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 48.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 48.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 48.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 47.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 47.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 46.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 46.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 46.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 45.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 45.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 45.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 45.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 45.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 45.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 44.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 44.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 44.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 44.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 43.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 43.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 43.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 42.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 42.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 42.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 42.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 42.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 42.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 42.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 42.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 42.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 42.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 41.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 41.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 41.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 41.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 41.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 41.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 41.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 41.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 40.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 40.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 40.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 40.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 40.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 40.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 40.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 39.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 39.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 39.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 39.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 39.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 39.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 39.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 39.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 39.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 39.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 39.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 39.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 39.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 39.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 39.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 38.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 38.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 38.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 38.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 38.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 38.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 38.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 38.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 38.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 38.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 37.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 37.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 37.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 37.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 37.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 37.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 37.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 37.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 37.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 37.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 36.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 36.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 36.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 36.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 36.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 36.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 35.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 35.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 35.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 35.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 35.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 35.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 35.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 35.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 35.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 35.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 35.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 35.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 34.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 34.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 34.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 34.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 34.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 34.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 34.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 34.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 34.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 34.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 34.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 34.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 33.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 33.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 33.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 33.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 33.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 33.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 32.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 32.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 32.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 32.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 32.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 32.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 31.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 31.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 31.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 31.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 31.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 30.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 30.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 30.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 30.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 30.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 29.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 29.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 29.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 29.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 29.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 28.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 28.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 27.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 26.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 25.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 25.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 24.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 24.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 24.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 23.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 22.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 20.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 20.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 19.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 17.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 5.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 56.0
Samples: 4

Max nTPM: 62.8
Min nTPM: 48.2
Sample A Female 62.8
Sample B Female 56.7
Sample C Male 56.3
Sample D Male 48.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 32.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 30.0
Sample A Male 33.0
Sample B Male 30.0
Sample C Female 35.0
Sample D Female 32.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
69540387 Antisense, RP_050426_01_F09, Mouse strain C57BL/6J (56 days, male) 0.1

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