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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
290.8
nTPM
Monaco:
234.6
nTPM
Schmiedel:
15.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
290.8
HPA sample
nTPM
gdT-cell nTPM: 290.8
Samples: 6
Max nTPM: 348.1
Min nTPM: 243.5
P10809_1007
275.4
P10809_1022
311.9
P10809_1041
348.1
P10809_1060
243.5
P10809_1077
270.5
P10809_1098
295.3
MAIT T-cell nTPM: 141.5
Samples: 6
Max nTPM: 186.6
Min nTPM: 98.1
P10809_1006
135.9
P10809_1024
130.9
P10809_1043
98.1
P10809_1062
147.9
P10809_1083
186.6
P10809_1097
149.6
Memory CD4 T-cell nTPM: 52.0
Samples: 6
Max nTPM: 98.3
Min nTPM: 27.8
P10809_1014
27.8
P10809_1026
29.6
P10809_1045
37.1
P10809_1064
98.3
P10809_1086
89.2
P10809_1113
29.8
Memory CD8 T-cell nTPM: 189.2
Samples: 5
Max nTPM: 260.7
Min nTPM: 146.2
P10809_1012
146.2
P10809_1027
159.4
P10809_1046
204.6
P10809_1065
260.7
P10809_1111
174.9
Naive CD4 T-cell nTPM: 31.5
Samples: 6
Max nTPM: 68.0
Min nTPM: 20.5
P10809_1015
24.6
P10809_1030
23.5
P10809_1049
24.0
P10809_1068
20.5
P10809_1085
68.0
P10809_1112
28.1
Naive CD8 T-cell nTPM: 141.4
Samples: 6
Max nTPM: 248.4
Min nTPM: 57.3
P10809_1016
57.3
P10809_1031
106.3
P10809_1050
145.8
P10809_1069
210.3
P10809_1087
248.4
P10809_1110
80.3
T-reg nTPM: 33.6
Samples: 6
Max nTPM: 64.3
Min nTPM: 12.7
P10809_1018
35.4
P10809_1037
32.6
P10809_1056
64.3
P10809_1075
12.7
P10809_1094
34.4
P10809_1106
22.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
234.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 48.7
Samples: 4
Max nTPM: 68.6
Min nTPM: 34.5
RHH5202_R3573
68.6
RHH5230_R3602
34.5
RHH5259_R3631
42.0
RHH5288_R3660
49.6
Effector memory CD8 T-cell nTPM: 195.6
Samples: 4
Max nTPM: 239.7
Min nTPM: 119.8
RHH5203_R3574
239.7
RHH5231_R3603
225.9
RHH5260_R3632
119.8
RHH5289_R3661
196.8
MAIT T-cell nTPM: 123.1
Samples: 4
Max nTPM: 128.9
Min nTPM: 110.6
RHH5233_R3605
124.4
RHH5205_R3576
110.6
RHH5262_R3634
128.9
RHH5297_R3663
128.4
Memory CD4 T-cell TFH nTPM: 19.2
Samples: 4
Max nTPM: 26.0
Min nTPM: 13.6
RHH5300_R3666
16.4
RHH5236_R3608
20.7
RHH5265_R3637
13.6
RHH5208_R3579
26.0
Memory CD4 T-cell Th1 nTPM: 28.4
Samples: 4
Max nTPM: 40.6
Min nTPM: 19.7
RHH5210_R3581
40.6
RHH5302_R3668
30.5
RHH5238_R3610
19.7
RHH5267_R3639
22.6
Memory CD4 T-cell Th1/Th17 nTPM: 33.2
Samples: 4
Max nTPM: 50.2
Min nTPM: 12.6
RHH5303_R3669
50.2
RHH5211_R3582
49.2
RHH5239_R3611
12.6
RHH5268_R3640
20.9
Memory CD4 T-cell Th17 nTPM: 27.3
Samples: 4
Max nTPM: 36.3
Min nTPM: 20.3
RHH5304_R3670
36.3
RHH5212_R3583
30.7
RHH5240_R3612
20.3
RHH5269_R3641
21.9
Memory CD4 T-cell Th2 nTPM: 14.6
Samples: 4
Max nTPM: 20.2
Min nTPM: 7.5
RHH5305_R3671
15.4
RHH5213_R3584
15.4
RHH5241_R3613
7.5
RHH5270_R3642
20.2
Naive CD4 T-cell nTPM: 25.3
Samples: 4
Max nTPM: 29.9
Min nTPM: 22.5
RHH5306_R3672
25.3
RHH5214_R3585
22.5
RHH5242_R3614
23.6
RHH5271_R3643
29.9
Naive CD8 T-cell nTPM: 39.0
Samples: 4
Max nTPM: 54.9
Min nTPM: 19.0
RHH5201_R3572
41.8
RHH5229_R3601
19.0
RHH5258_R3630
54.9
RHH5287_R3659
40.4
Non-Vd2 gdTCR nTPM: 234.6
Samples: 4
Max nTPM: 336.2
Min nTPM: 126.8
RHH5235_R3607
126.8
RHH5264_R3636
238.3
RHH5207_R3578
336.2
RHH5299_R3665
237.2
T-reg nTPM: 16.3
Samples: 4
Max nTPM: 20.7
Min nTPM: 11.7
RHH5301_R3667
20.7
RHH5237_R3609
17.1
RHH5266_R3638
11.7
RHH5209_R3580
15.6
Terminal effector memory CD4 T-cell nTPM: 117.5
Samples: 2
Max nTPM: 117.5
Min nTPM: 117.5
RHH5243_R3615
117.5
RHH5272_R3644
117.5
Terminal effector memory CD8 T-cell nTPM: 233.1
Samples: 4
Max nTPM: 319.9
Min nTPM: 134.4
RHH5232_R3604
219.5
RHH5204_R3575
319.9
RHH5261_R3633
134.4
RHH5296_R3662
258.4
Vd2 gdTCR nTPM: 175.3
Samples: 4
Max nTPM: 329.9
Min nTPM: 104.8
RHH5234_R3606
104.8
RHH5206_R3577
329.9
RHH5263_R3635
123.9
RHH5298_R3664
142.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.