We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ALDOC
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ALDOC
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

44.621
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:637.1 nTPM
HPA Brain:855.9 nTPM
GTEx:637.1 nTPM
Pig:1068.2 nTPM
Mouse:1074.1 nTPM
Allen mouse:9.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA067442
Hypothalamus mean intensity 44.621
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 5.533
Periventricular hypothalamic nucleus 20.650
Supraoptic nucleus 17.291
Tuberal nucleus 29.317
Ventral tuberomammillary nucleus -
Lateral preoptic area 6.669
Medial preoptic area 17.289
Suprachiasmatic nucleus 22.328
Paraventricular hypothalamic nucleus 6.791
Anterior hypothalamic area, central 19.484
Ventral medial hypothalamic nucleus 35.331
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 44.621
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 0.803
Dorsal medial hypothalamic nucleus 7.875
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

855.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 474.9
2226 Male, age 75, left hemisphere 499.2
1961 Female, age 42, unknown 450.6
Dorsomedial nucleus
nTPM: 707.1
1989 Male, age 62, unknown 997.6
2017 Female, age 42, unknown 574.0
2041 Female, age 72, unknown 549.6
Lateral hypothalamic area
nTPM: 583.0
1791 Male, age 80, right hemisphere 823.9
2412 Male, age 62, unknown 537.0
2228 Male, age 66, unknown 520.0
2271 Male, age 75, both hemispheres 451.3
Mammillary body
nTPM: 855.9
2413 Male, age 66, unknown 1173.5
1923 Female, age 72, unknown 1118.2
1945 Male, age 80, right hemisphere 741.8
1834 Female, age 42, unknown 677.3
1948 Female, age 72, unknown 568.6
Paraventricular nucleus
nTPM: 445.7
2700 Male, age 62, unknown 445.7
Preoptic area
nTPM: 721.3
1861 Female, age 42, unknown 821.7
1907 Male, age 80, right hemisphere 729.5
2414 Female, age 72, unknown 612.8
Supraoptic nucleus
nTPM: 584.1
1894 Female, age 72, unknown 647.7
2835 Female, age 72, unknown 589.7
2043 Male, age 62, unknown 514.9
Ventromedial nucleus
nTPM: 524.3
1982 Female, age 72, unknown 603.7
1822 Female, age 42, unknown 444.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

637.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 637.1
Samples: 257

Max nTPM: 1650.0
Min nTPM: 179.5
Std nTPM: 222.6
Median nTPM: 618.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1650.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1414.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1323.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1310.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1237.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1214.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1198.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1124.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1058.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1057.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1043.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1035.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1034.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 989.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 987.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 972.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 968.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 956.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 955.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 952.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 952.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 949.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 945.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 945.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 930.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 921.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 918.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 906.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 905.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 892.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 891.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 890.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 884.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 880.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 878.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 877.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 865.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 857.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 853.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 849.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 846.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 838.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 837.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 836.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 836.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 833.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 830.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 830.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 826.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 819.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 815.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 814.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 812.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 811.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 810.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 810.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 808.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 807.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 804.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 800.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 793.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 785.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 771.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 768.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 760.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 760.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 759.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 756.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 749.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 746.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 746.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 736.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 734.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 733.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 727.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 726.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 726.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 723.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 721.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 716.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 716.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 715.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 712.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 707.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 699.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 699.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 696.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 687.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 681.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 678.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 677.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 673.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 671.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 671.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 663.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 663.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 663.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 662.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 659.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 659.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 658.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 655.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 655.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 653.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 652.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 649.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 648.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 647.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 646.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 644.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 639.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 636.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 635.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 635.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 634.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 634.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 632.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 632.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 631.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 631.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 631.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 630.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 630.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 630.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 629.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 621.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 621.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 618.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 618.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 614.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 611.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 603.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 601.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 600.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 596.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 596.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 595.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 594.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 591.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 588.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 581.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 581.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 579.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 578.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 577.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 573.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 573.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 571.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 570.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 569.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 566.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 566.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 565.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 561.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 559.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 554.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 552.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 547.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 547.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 547.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 547.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 543.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 540.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 536.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 533.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 530.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 525.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 525.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 523.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 522.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 521.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 520.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 519.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 518.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 517.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 515.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 515.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 514.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 513.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 512.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 509.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 507.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 506.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 504.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 496.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 496.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 493.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 491.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 491.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 491.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 489.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 486.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 486.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 486.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 482.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 478.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 474.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 474.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 471.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 467.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 463.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 462.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 458.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 458.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 449.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 447.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 446.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 446.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 446.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 445.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 442.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 437.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 433.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 432.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 431.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 430.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 428.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 428.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 425.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 422.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 421.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 421.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 419.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 416.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 416.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 415.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 414.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 410.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 406.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 398.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 397.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 389.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 389.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 381.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 374.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 362.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 360.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 358.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 357.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 347.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 343.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 343.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 334.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 319.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 315.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 314.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 308.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 303.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 293.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 291.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 288.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 275.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 267.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 250.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 200.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 198.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 179.5
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1068.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1068.2
Samples: 4

Max nTPM: 1255.7
Min nTPM: 821.9
Sample A Female 1255.7
Sample B Female 1194.5
Sample C Male 1000.6
Sample D Male 821.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1074.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1074.1
Samples: 4

Max nTPM: 1216.8
Min nTPM: 1009.7
Sample A Male 1009.7
Sample B Male 1216.8
Sample C Female 1046.7
Sample D Female 1023.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.7
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 13.6
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 12.5
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 2.9
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 2.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo