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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:394.7 nTPM
HPA Brain:969.7 nTPM
GTEx:394.7 nTPM
Pig:475.1 nTPM
Mouse:2314.8 nTPM
Allen mouse:17.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

969.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 749.6
2226 Male, age 75, left hemisphere 894.9
1961 Female, age 42, unknown 604.4
Dorsomedial nucleus
nTPM: 588.6
1989 Male, age 62, unknown 754.8
2041 Female, age 72, unknown 531.2
2017 Female, age 42, unknown 479.6
Lateral hypothalamic area
nTPM: 522.6
1791 Male, age 80, right hemisphere 809.6
2271 Male, age 75, both hemispheres 524.7
2228 Male, age 66, unknown 397.8
2412 Male, age 62, unknown 358.4
Mammillary body
nTPM: 536.8
1923 Female, age 72, unknown 653.3
1945 Male, age 80, right hemisphere 630.7
2413 Male, age 66, unknown 523.1
1834 Female, age 42, unknown 488.4
1948 Female, age 72, unknown 388.6
Paraventricular nucleus
nTPM: 392.2
2700 Male, age 62, unknown 392.2
Preoptic area
nTPM: 572.4
1907 Male, age 80, right hemisphere 662.9
1861 Female, age 42, unknown 585.9
2414 Female, age 72, unknown 468.5
Supraoptic nucleus
nTPM: 969.7
1894 Female, age 72, unknown 1223.8
2043 Male, age 62, unknown 1065.8
2835 Female, age 72, unknown 619.6
Ventromedial nucleus
nTPM: 630.4
1822 Female, age 42, unknown 643.0
1982 Female, age 72, unknown 617.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

394.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 394.7
Samples: 257

Max nTPM: 1176.8
Min nTPM: 123.2
Std nTPM: 154.8
Median nTPM: 369.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1176.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 874.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 841.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 806.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 801.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 793.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 787.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 765.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 760.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 753.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 731.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 728.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 725.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 708.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 705.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 702.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 689.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 668.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 662.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 609.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 603.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 591.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 583.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 576.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 570.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 566.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 565.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 565.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 564.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 563.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 561.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 555.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 551.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 542.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 540.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 539.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 539.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 538.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 538.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 535.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 529.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 529.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 527.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 525.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 524.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 521.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 521.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 519.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 518.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 515.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 514.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 509.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 507.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 502.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 501.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 500.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 499.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 492.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 491.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 490.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 489.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 484.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 482.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 480.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 479.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 474.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 473.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 473.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 471.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 469.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 462.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 462.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 460.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 457.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 457.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 453.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 451.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 446.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 445.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 443.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 442.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 440.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 440.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 435.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 433.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 431.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 429.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 429.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 429.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 428.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 428.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 426.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 426.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 421.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 421.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 419.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 418.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 418.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 412.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 406.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 405.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 403.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 401.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 401.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 401.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 400.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 398.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 397.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 397.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 396.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 396.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 393.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 390.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 389.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 388.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 388.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 387.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 382.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 382.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 380.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 377.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 376.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 376.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 376.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 373.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 373.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 373.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 370.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 369.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 368.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 365.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 363.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 362.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 361.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 360.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 359.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 358.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 358.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 358.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 356.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 352.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 352.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 352.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 351.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 348.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 345.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 344.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 343.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 343.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 342.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 339.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 336.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 336.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 336.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 336.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 336.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 335.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 334.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 332.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 331.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 326.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 325.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 325.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 325.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 324.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 324.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 323.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 322.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 321.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 320.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 314.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 313.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 310.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 310.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 310.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 308.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 307.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 303.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 302.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 301.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 300.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 298.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 297.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 297.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 295.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 290.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 290.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 289.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 289.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 288.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 287.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 286.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 285.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 284.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 284.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 283.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 280.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 280.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 279.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 278.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 278.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 277.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 277.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 274.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 270.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 270.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 269.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 267.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 265.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 265.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 261.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 259.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 258.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 258.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 257.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 255.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 254.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 250.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 250.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 249.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 246.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 244.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 241.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 239.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 239.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 238.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 238.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 238.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 236.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 235.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 228.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 225.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 225.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 222.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 220.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 216.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 215.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 214.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 213.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 208.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 206.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 198.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 198.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 192.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 190.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 186.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 180.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 172.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 167.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 162.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 158.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 152.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 147.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 143.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 134.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 131.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 123.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

475.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 475.1
Samples: 4

Max nTPM: 585.5
Min nTPM: 348.8
Sample A Female 585.5
Sample B Female 508.2
Sample C Male 457.8
Sample D Male 348.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2314.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2314.8
Samples: 4

Max nTPM: 2558.4
Min nTPM: 2129.3
Sample A Male 2129.3
Sample B Male 2558.4
Sample C Female 2380.2
Sample D Female 2191.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.9
1692 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 17.9
1691 Antisense, RP_Baylor_102700, Mouse strain C57BL/6J (56 days, male) 11.3

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