A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
0.5
nTPM
Monaco:
13.2
nTPM
Schmiedel:
44.0
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
0.5
HPA sample
nTPM
Classical monocyte nTPM: 0.5
Samples: 6
Max nTPM: 0.7
Min nTPM: 0.2
P10809_1003
0.7
P10809_1020
0.2
P10809_1039
0.4
P10809_1058
0.4
P10809_1080
0.7
P10809_1107
0.4
Intermediate monocyte nTPM: 0.2
Samples: 6
Max nTPM: 0.5
Min nTPM: 0.0
P10809_1004
0.4
P10809_1023
0.2
P10809_1042
0.0
P10809_1061
0.0
P10809_1081
0.5
P10809_1108
0.0
Non-classical monocyte nTPM: 0.2
Samples: 5
Max nTPM: 0.6
Min nTPM: 0.0
P10809_1005
0.2
P10809_1053
0.2
P10809_1072
0.0
P10809_1082
0.6
P10809_1109
0.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
13.2
Monaco sample
nTPM
Classical monocyte nTPM: 13.2
Samples: 4
Max nTPM: 15.3
Min nTPM: 10.1
RHH5313_R3680
10.1
RHH5221_R3593
15.3
RHH5250_R3622
13.0
RHH5279_R3651
14.4
Intermediate monocyte nTPM: 12.4
Samples: 4
Max nTPM: 20.6
Min nTPM: 8.4
RHH5314_R3681
9.2
RHH5222_R3594
11.4
RHH5251_R3623
20.6
RHH5280_R3652
8.4
Non-classical monocyte nTPM: 8.4
Samples: 4
Max nTPM: 11.1
Min nTPM: 4.6
RHH5315_R3682
8.1
RHH5223_R3595
11.1
RHH5252_R3624
9.9
RHH5281_R3653
4.6
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
44.0
Schmiedel sample id
TPM
Classical monocyte TPM: 44.0
Samples: 91
Max TPM: 55.2
Min TPM: 32.8
MONOCYTES_1
55.2
MONOCYTES_2
54.3
MONOCYTES_3
52.8
MONOCYTES_4
52.0
MONOCYTES_5
51.8
MONOCYTES_6
51.2
MONOCYTES_7
51.0
MONOCYTES_8
50.9
MONOCYTES_9
50.8
MONOCYTES_10
50.6
MONOCYTES_11
50.6
MONOCYTES_12
50.5
MONOCYTES_13
50.3
MONOCYTES_14
50.1
MONOCYTES_15
50.0
MONOCYTES_16
49.7
MONOCYTES_17
49.6
MONOCYTES_18
49.3
MONOCYTES_19
49.2
MONOCYTES_20
49.1
MONOCYTES_21
48.8
MONOCYTES_22
48.8
MONOCYTES_23
48.6
MONOCYTES_24
48.4
MONOCYTES_25
48.2
MONOCYTES_26
47.9
MONOCYTES_27
47.9
MONOCYTES_28
47.8
MONOCYTES_29
47.3
MONOCYTES_30
46.9
MONOCYTES_31
46.8
MONOCYTES_32
46.8
MONOCYTES_33
46.6
MONOCYTES_34
46.5
MONOCYTES_35
46.4
MONOCYTES_36
46.4
MONOCYTES_37
46.3
MONOCYTES_38
46.1
MONOCYTES_39
45.9
MONOCYTES_40
45.3
MONOCYTES_41
44.8
MONOCYTES_42
44.8
MONOCYTES_43
44.6
MONOCYTES_44
44.5
MONOCYTES_45
44.3
MONOCYTES_46
44.2
MONOCYTES_47
44.1
MONOCYTES_48
44.1
MONOCYTES_49
43.9
MONOCYTES_50
43.8
MONOCYTES_51
43.7
MONOCYTES_52
43.5
MONOCYTES_53
43.2
MONOCYTES_54
43.2
MONOCYTES_55
43.1
MONOCYTES_56
42.6
MONOCYTES_57
42.2
MONOCYTES_58
42.2
MONOCYTES_59
41.9
MONOCYTES_60
41.8
MONOCYTES_61
41.7
MONOCYTES_62
41.4
MONOCYTES_63
41.3
MONOCYTES_64
41.2
MONOCYTES_65
40.7
MONOCYTES_66
40.6
MONOCYTES_67
40.5
MONOCYTES_68
40.2
MONOCYTES_69
40.1
MONOCYTES_70
39.8
MONOCYTES_71
38.9
MONOCYTES_72
38.7
MONOCYTES_73
38.3
MONOCYTES_74
38.3
MONOCYTES_75
38.1
MONOCYTES_76
37.8
MONOCYTES_77
37.6
MONOCYTES_78
37.3
MONOCYTES_79
36.4
MONOCYTES_80
36.4
MONOCYTES_81
36.2
MONOCYTES_82
36.1
MONOCYTES_83
36.0
MONOCYTES_84
36.0
MONOCYTES_85
36.0
MONOCYTES_86
35.3
MONOCYTES_87
35.2
MONOCYTES_88
34.4
MONOCYTES_89
33.7
MONOCYTES_90
33.4
MONOCYTES_91
32.8
Show allShow less
Non-classical monocyte TPM: 38.4
Samples: 90
Max TPM: 51.7
Min TPM: 24.7
M2_1
51.7
M2_2
50.8
M2_3
50.4
M2_4
48.6
M2_5
48.3
M2_6
47.8
M2_7
47.5
M2_8
47.3
M2_9
47.1
M2_10
46.6
M2_11
46.5
M2_12
46.3
M2_13
46.2
M2_14
46.1
M2_15
45.6
M2_16
45.4
M2_17
44.8
M2_18
44.6
M2_19
44.4
M2_20
44.3
M2_21
43.8
M2_22
43.5
M2_23
43.4
M2_24
43.4
M2_25
43.0
M2_26
42.9
M2_27
42.8
M2_28
42.8
M2_29
42.7
M2_30
41.9
M2_31
41.8
M2_32
41.5
M2_33
41.4
M2_34
41.3
M2_35
41.2
M2_36
41.2
M2_37
40.7
M2_38
40.6
M2_39
40.5
M2_40
40.3
M2_41
40.1
M2_42
39.9
M2_43
39.6
M2_44
38.7
M2_45
38.5
M2_46
37.8
M2_47
37.6
M2_48
37.6
M2_49
37.5
M2_50
37.4
M2_51
37.0
M2_52
36.8
M2_53
36.6
M2_54
36.4
M2_55
36.4
M2_56
36.2
M2_57
36.1
M2_58
36.0
M2_59
35.6
M2_60
35.3
M2_61
34.5
M2_62
34.5
M2_63
34.4
M2_64
34.4
M2_65
34.3
M2_66
34.2
M2_67
33.6
M2_68
33.4
M2_69
33.0
M2_70
32.5
M2_71
32.4
M2_72
32.0
M2_73
31.5
M2_74
31.3
M2_75
31.3
M2_76
31.1
M2_77
30.7
M2_78
30.3
M2_79
29.9
M2_80
29.8
M2_81
29.4
M2_82
29.1
M2_83
28.1
M2_84
28.1
M2_85
28.0
M2_86
27.8
M2_87
27.6
M2_88
26.3
M2_89
26.1
M2_90
24.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
