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ATP5F1B
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  • TISSUE

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  • ATP5F1B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:278.7 nTPM
HPA Brain:472.4 nTPM
GTEx:278.7 nTPM
Pig:0.0 nTPM
Mouse:1154.2 nTPM
Allen mouse:26.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

472.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 282.2
2226 Male, age 75, left hemisphere 383.8
1961 Female, age 42, unknown 180.5
Dorsomedial nucleus
nTPM: 260.2
1989 Male, age 62, unknown 359.1
2041 Female, age 72, unknown 228.4
2017 Female, age 42, unknown 193.1
Lateral hypothalamic area
nTPM: 344.7
2228 Male, age 66, unknown 397.8
2271 Male, age 75, both hemispheres 394.9
1791 Male, age 80, right hemisphere 376.6
2412 Male, age 62, unknown 209.4
Mammillary body
nTPM: 472.4
1923 Female, age 72, unknown 822.3
2413 Male, age 66, unknown 451.0
1948 Female, age 72, unknown 405.1
1834 Female, age 42, unknown 354.1
1945 Male, age 80, right hemisphere 329.7
Paraventricular nucleus
nTPM: 197.6
2700 Male, age 62, unknown 197.6
Preoptic area
nTPM: 255.6
1907 Male, age 80, right hemisphere 309.9
1861 Female, age 42, unknown 244.5
2414 Female, age 72, unknown 212.5
Supraoptic nucleus
nTPM: 236.3
1894 Female, age 72, unknown 277.3
2835 Female, age 72, unknown 231.6
2043 Male, age 62, unknown 200.1
Ventromedial nucleus
nTPM: 217.8
1982 Female, age 72, unknown 253.4
1822 Female, age 42, unknown 182.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 278.7
Samples: 257

Max nTPM: 819.5
Min nTPM: 106.5
Std nTPM: 92.8
Median nTPM: 267.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 819.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 751.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 612.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 588.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 585.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 518.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 496.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 476.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 459.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 456.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 451.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 451.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 424.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 415.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 413.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 399.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 398.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 392.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 389.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 389.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 386.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 384.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 383.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 381.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 380.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 379.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 379.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 377.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 377.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 376.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 375.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 373.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 373.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 370.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 369.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 369.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 366.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 361.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 360.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 359.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 357.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 356.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 351.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 351.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 347.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 346.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 345.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 344.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 342.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 342.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 340.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 339.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 339.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 338.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 337.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 334.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 333.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 331.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 330.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 326.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 325.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 324.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 324.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 323.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 322.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 320.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 319.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 315.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 315.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 314.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 314.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 313.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 311.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 310.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 310.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 309.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 309.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 308.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 306.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 306.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 305.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 303.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 302.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 301.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 301.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 301.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 300.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 299.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 299.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 299.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 298.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 298.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 297.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 296.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 296.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 295.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 295.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 294.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 294.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 293.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 293.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 292.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 288.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 287.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 287.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 284.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 284.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 283.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 279.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 279.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 278.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 276.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 276.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 275.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 275.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 274.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 273.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 273.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 271.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 271.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 271.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 270.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 270.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 269.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 268.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 268.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 268.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 267.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 267.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 267.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 264.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 262.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 261.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 260.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 259.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 253.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 253.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 253.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 252.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 251.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 250.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 250.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 249.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 249.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 249.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 248.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 246.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 246.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 245.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 244.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 243.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 242.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 241.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 241.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 240.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 240.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 239.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 236.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 236.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 235.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 235.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 234.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 234.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 233.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 233.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 232.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 232.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 231.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 231.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 230.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 229.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 229.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 229.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 227.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 227.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 226.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 226.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 225.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 224.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 224.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 224.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 223.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 222.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 222.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 222.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 222.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 221.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 220.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 219.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 218.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 217.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 216.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 216.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 215.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 215.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 215.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 215.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 214.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 212.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 212.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 211.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 210.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 210.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 209.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 208.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 207.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 207.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 206.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 206.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 205.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 204.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 203.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 203.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 201.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 200.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 199.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 199.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 199.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 195.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 195.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 193.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 192.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 192.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 192.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 191.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 191.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 191.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 189.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 188.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 187.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 187.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 187.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 185.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 184.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 181.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 178.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 176.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 176.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 176.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 175.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 174.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 174.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 173.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 172.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 168.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 168.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 165.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 164.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 161.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 159.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 154.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 138.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 137.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 132.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 132.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 130.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 106.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1154.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1154.2
Samples: 4

Max nTPM: 1246.7
Min nTPM: 1061.5
Sample A Male 1061.5
Sample B Male 1246.7
Sample C Female 1147.1
Sample D Female 1161.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 26.9
70528264 Antisense, RP_050623_02_C01, Mouse strain C57BL/6J (56 days, male) 26.9

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