HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:250.9 nTPM
HPA Brain:135.4 nTPM
GTEx:250.9 nTPM
FANTOM5:188.4 Scaled Tags Per Million
Pig:43.5 nTPM
Mouse:138.5 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019377
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 135.4
Sample id Sample description nTPM
Hippocampus
nTPM: 135.4
1898 Male, age 80, left hemisphere 163.0
2148 Female, age 91, left hemisphere 138.6
1855 Male, age 76, left hemisphere 137.8
1911 Female, age 85, right hemisphere 135.3
2529 Female, age 94, left hemisphere 135.1
2621 Female, age 67, right hemisphere 102.3
Dentate gyrus
nTPM: 108.7
2530 Female, age 94, left hemisphere 139.3
2528 Male, age 74, both hemispheres 139.1
2010 Male, age 76, both hemispheres 111.7
1927 Female, age 91, both hemispheres 91.8
2246 Female, age 85, both hemispheres 90.9
2531 Female, age 67, both hemispheres 79.7
Entorhinal gyrus
nTPM: 87.7
2117 Female, age 91, right hemisphere 166.5
1938 Female, age 85, left hemisphere 88.1
1787 Male, age 76, left hemisphere 82.7
2686 Male, age 75, right hemisphere 79.5
2764 Male, age 80, right hemisphere 60.9
2613 Female, age 94, left hemisphere 48.2
Hippocampus, CA1
nTPM: 95.6
1873 Female, age 85, both hemispheres 130.2
2527 Male, age 74, both hemispheres 108.6
2082 Female, age 91, right hemisphere 92.0
2045 Male, age 76, both hemispheres 83.7
2749 Male, age 80, left hemisphere 63.2
Hippocampus, CA2
nTPM: 111.6
2249 Male, age 74, both hemispheres 130.4
1963 Male, age 80, left hemisphere 126.9
1940 Female, age 85, left hemisphere 123.8
2437 Female, age 94, left hemisphere 103.8
2113 Female, age 91, right hemisphere 102.7
1892 Male, age 76, both hemispheres 81.9
Hippocampus, CA3
nTPM: 95.1
1891 Female, age 85, both hemispheres 129.4
2861 Female, age 67, both hemispheres 100.7
2436 Male, age 74, both hemispheres 96.0
1867 Male, age 76, both hemispheres 91.7
2620 Female, age 94, left hemisphere 87.9
2137 Male, age 80, left hemisphere 64.7
Parahippocampal cortex
nTPM: 74.8
2018 Male, age 76, both hemispheres 101.6
2250 Female, age 67, right hemisphere 86.5
2245 Female, age 91, both hemispheres 85.4
1933 Female, age 85, both hemispheres 81.0
2692 Male, age 74, both hemispheres 78.1
1990 Female, age 91, right hemisphere 76.7
1850 Male, age 80, both hemispheres 65.9
2532 Female, age 72, left hemisphere 59.1
2622 Female, age 67, right hemisphere 59.0
2693 Female, age 94, both hemispheres 55.1
Perirhinal gyrus
nTPM: 68.4
2521 Female, age 94, right hemisphere 82.9
1841 Female, age 85, right hemisphere 74.2
1794 Male, age 80, right hemisphere 69.0
1847 Female, age 91, left hemisphere 63.9
2848 Male, age 76, right hemisphere 52.0
Subiculum
nTPM: 112.6
2729 Female, age 91, right hemisphere 163.1
2042 Male, age 76, both hemispheres 133.4
1901 Male, age 80, both hemispheres 101.7
2619 Male, age 74, both hemispheres 94.2
1977 Female, age 85, both hemispheres 93.2
2438 Female, age 94, left hemisphere 90.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 250.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 250.9
Samples: 255

Max nTPM: 485.8
Min nTPM: 126.4
Std nTPM: 68.0
Median nTPM: 245.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 485.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 448.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 446.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 441.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 425.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 407.7
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 405.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 397.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 390.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 368.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 367.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 188.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.4
FF:10153-102I9 76 years, female 274.0
FF:10169-103B7 60 years, female 102.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 43.5
Pig sample Sample description nTPM
Subiculum
nTPM: 40.4
Samples: 4

Max nTPM: 54.0
Min nTPM: 32.3
Sample A Female 54.0
Sample B Female 39.4
Sample C Male 36.0
Sample D Male 32.3
Dorsal hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 48.7
Min nTPM: 29.7
Sample A Female 48.7
Sample B Female 32.4
Sample C Male 44.3
Sample D Male 29.7
Entorhinal cortex
nTPM: 43.5
Samples: 4

Max nTPM: 52.1
Min nTPM: 35.6
Sample A Female 39.9
Sample B Female 52.1
Sample C Male 46.4
Sample D Male 35.6
Ventral hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 53.9
Min nTPM: 32.1
Sample A Female 44.1
Sample B Female 36.2
Sample C Male 53.9
Sample D Male 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 138.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.5
Samples: 4

Max nTPM: 156.5
Min nTPM: 107.8
Sample A Male 156.5
Sample B Male 150.2
Sample C Female 139.6
Sample D Female 107.8
Hippocampal formation
nTPM: 112.8
Samples: 4

Max nTPM: 126.3
Min nTPM: 94.0
Sample A Male 126.3
Sample B Male 108.2
Sample C Female 94.0
Sample D Female 122.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
633273 Antisense, RP_040907_02_C08, Mouse strain C57BL/6J (56 days, male) 1.8

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