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  • SUMMARY

  • TISSUE

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  • CDK2AP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:228.5 nTPM
HPA Brain:211.7 nTPM
GTEx:228.5 nTPM
Pig:49.8 nTPM
Mouse:113.1 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

211.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 81.6
2226 Male, age 75, left hemisphere 86.1
1961 Female, age 42, unknown 77.1
Dorsomedial nucleus
nTPM: 118.9
1989 Male, age 62, unknown 139.0
2041 Female, age 72, unknown 111.4
2017 Female, age 42, unknown 106.4
Lateral hypothalamic area
nTPM: 104.7
1791 Male, age 80, right hemisphere 139.3
2271 Male, age 75, both hemispheres 107.4
2412 Male, age 62, unknown 103.9
2228 Male, age 66, unknown 68.4
Mammillary body
nTPM: 169.5
1834 Female, age 42, unknown 211.5
1923 Female, age 72, unknown 170.3
1945 Male, age 80, right hemisphere 167.3
2413 Male, age 66, unknown 153.5
1948 Female, age 72, unknown 145.0
Paraventricular nucleus
nTPM: 85.8
2700 Male, age 62, unknown 85.8
Preoptic area
nTPM: 99.0
1861 Female, age 42, unknown 116.7
2414 Female, age 72, unknown 104.4
1907 Male, age 80, right hemisphere 76.0
Supraoptic nucleus
nTPM: 211.7
1894 Female, age 72, unknown 265.5
2043 Male, age 62, unknown 263.1
2835 Female, age 72, unknown 106.6
Ventromedial nucleus
nTPM: 78.6
1822 Female, age 42, unknown 79.2
1982 Female, age 72, unknown 78.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

228.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 228.5
Samples: 257

Max nTPM: 573.8
Min nTPM: 93.0
Std nTPM: 85.3
Median nTPM: 208.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 573.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 573.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 530.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 511.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 490.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 433.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 427.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 427.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 426.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 415.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 415.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 410.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 404.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 403.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 390.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 365.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 364.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 364.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 362.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 360.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 359.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 358.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 357.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 357.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 356.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 353.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 349.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 348.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 348.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 346.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 337.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 327.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 326.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 325.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 321.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 321.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 314.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 311.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 307.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 300.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 299.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 298.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 298.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 298.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 294.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 292.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 291.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 291.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 290.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 289.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 288.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 285.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 284.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 283.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 282.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 282.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 279.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 279.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 278.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 276.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 275.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 273.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 270.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 270.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 269.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 268.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 267.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 266.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 265.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 264.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 264.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 263.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 262.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 261.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 260.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 256.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 256.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 253.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 252.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 251.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 250.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 248.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 248.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 248.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 247.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 247.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 245.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 244.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 244.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 244.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 243.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 242.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 241.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 241.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 239.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 239.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 236.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 234.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 233.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 233.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 233.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 233.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 230.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 230.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 228.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 226.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 226.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 224.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 224.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 223.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 221.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 219.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 219.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 218.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 218.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 216.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 216.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 216.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 215.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 215.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 214.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 213.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 212.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 212.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 212.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 211.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 211.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 209.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 208.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 208.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 207.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 207.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 206.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 205.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 205.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 204.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 203.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 203.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 202.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 202.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 199.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 198.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 198.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 198.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 197.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 197.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 195.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 193.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 193.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 192.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 192.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 191.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 190.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 190.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 189.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 188.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 188.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 188.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 185.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 185.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 185.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 182.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 182.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 181.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 180.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 179.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 179.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 179.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 178.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 177.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 176.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 176.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 175.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 175.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 175.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 175.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 174.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 174.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 173.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 173.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 173.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 171.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 171.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 170.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 169.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 169.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 168.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 167.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 167.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 167.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 167.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 166.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 166.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 165.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 165.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 165.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 165.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 164.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 164.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 163.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 163.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 163.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 163.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 163.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 161.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 160.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 160.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 159.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 158.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 158.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 157.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 156.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 156.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 156.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 155.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 154.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 154.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 153.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 153.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 153.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 153.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 152.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 151.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 150.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 150.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 149.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 148.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 146.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 144.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 144.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 144.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 144.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 143.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 142.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 142.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 142.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 142.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 139.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 138.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 137.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 136.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 134.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 130.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 130.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 126.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 125.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 125.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 122.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 118.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 116.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 116.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 110.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 107.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 106.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 101.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 100.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 93.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 49.8
Samples: 4

Max nTPM: 66.5
Min nTPM: 32.4
Sample A Female 66.5
Sample B Female 51.3
Sample C Male 49.0
Sample D Male 32.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 113.1
Samples: 4

Max nTPM: 123.8
Min nTPM: 102.4
Sample A Male 102.4
Sample B Male 123.8
Sample C Female 116.6
Sample D Female 109.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.3
633273 Antisense, RP_040907_02_C08, Mouse strain C57BL/6J (56 days, male) 2.3

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