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  • TISSUE

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  • TPI1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:379.1 nTPM
HPA Brain:343.5 nTPM
GTEx:379.1 nTPM
Pig:317.9 nTPM
Mouse:818.8 nTPM
Allen mouse:17.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

343.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 288.6
2226 Male, age 75, left hemisphere 392.4
1961 Female, age 42, unknown 184.8
Dorsomedial nucleus
nTPM: 268.4
1989 Male, age 62, unknown 427.5
2041 Female, age 72, unknown 208.5
2017 Female, age 42, unknown 169.2
Lateral hypothalamic area
nTPM: 343.5
2271 Male, age 75, both hemispheres 434.9
1791 Male, age 80, right hemisphere 401.2
2228 Male, age 66, unknown 329.9
2412 Male, age 62, unknown 207.9
Mammillary body
nTPM: 339.9
1923 Female, age 72, unknown 513.4
2413 Male, age 66, unknown 374.9
1948 Female, age 72, unknown 292.7
1945 Male, age 80, right hemisphere 264.0
1834 Female, age 42, unknown 254.5
Paraventricular nucleus
nTPM: 217.4
2700 Male, age 62, unknown 217.4
Preoptic area
nTPM: 256.7
1907 Male, age 80, right hemisphere 304.3
1861 Female, age 42, unknown 236.3
2414 Female, age 72, unknown 229.4
Supraoptic nucleus
nTPM: 226.6
2835 Female, age 72, unknown 251.3
1894 Female, age 72, unknown 242.9
2043 Male, age 62, unknown 185.6
Ventromedial nucleus
nTPM: 222.1
1982 Female, age 72, unknown 255.1
1822 Female, age 42, unknown 189.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

379.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 379.1
Samples: 257

Max nTPM: 885.8
Min nTPM: 138.7
Std nTPM: 108.1
Median nTPM: 364.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 885.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 833.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 730.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 723.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 704.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 673.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 666.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 639.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 619.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 619.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 618.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 596.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 590.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 583.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 581.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 566.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 559.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 552.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 544.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 541.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 539.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 536.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 531.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 530.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 524.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 523.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 518.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 501.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 500.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 499.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 499.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 499.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 497.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 495.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 494.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 488.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 487.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 483.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 478.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 469.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 467.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 466.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 464.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 462.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 462.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 461.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 459.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 455.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 453.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 451.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 447.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 445.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 444.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 443.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 436.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 432.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 431.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 430.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 426.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 424.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 422.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 421.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 419.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 417.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 413.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 412.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 410.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 410.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 409.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 408.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 408.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 408.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 404.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 403.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 403.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 403.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 401.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 401.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 400.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 400.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 400.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 400.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 400.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 399.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 398.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 397.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 395.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 393.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 393.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 393.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 392.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 392.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 391.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 390.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 390.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 387.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 386.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 386.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 386.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 386.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 386.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 385.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 384.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 383.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 383.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 383.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 382.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 381.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 379.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 378.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 378.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 377.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 376.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 375.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 375.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 374.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 374.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 373.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 372.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 370.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 369.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 369.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 369.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 367.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 365.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 365.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 365.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 365.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 364.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 363.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 362.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 362.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 361.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 360.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 360.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 359.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 358.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 356.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 353.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 352.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 351.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 350.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 350.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 349.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 349.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 348.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 348.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 348.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 347.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 346.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 346.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 346.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 345.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 345.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 345.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 344.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 343.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 338.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 337.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 337.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 336.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 336.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 335.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 333.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 333.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 332.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 330.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 329.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 329.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 329.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 328.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 326.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 325.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 325.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 324.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 323.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 322.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 322.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 322.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 321.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 321.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 320.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 320.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 319.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 318.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 317.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 315.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 314.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 314.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 313.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 312.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 312.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 311.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 310.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 310.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 307.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 306.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 304.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 304.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 302.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 302.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 301.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 300.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 296.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 296.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 295.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 292.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 292.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 290.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 289.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 289.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 288.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 288.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 287.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 287.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 287.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 284.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 284.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 282.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 282.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 281.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 281.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 280.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 271.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 268.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 268.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 267.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 267.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 267.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 266.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 266.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 265.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 261.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 257.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 257.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 255.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 255.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 255.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 254.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 249.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 249.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 249.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 247.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 247.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 246.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 245.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 243.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 229.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 226.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 223.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 222.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 213.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 213.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 210.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 200.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 192.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 138.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 317.9
Samples: 4

Max nTPM: 384.0
Min nTPM: 254.3
Sample A Female 384.0
Sample B Female 344.4
Sample C Male 288.7
Sample D Male 254.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

818.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 818.9
Samples: 4

Max nTPM: 885.3
Min nTPM: 773.4
Sample A Male 773.4
Sample B Male 885.3
Sample C Female 812.9
Sample D Female 803.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.1
70191997 Antisense, RP_050517_01_A08, Mouse strain C57BL/6J (56 days, male) 17.1

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