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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • ENO2
EVOLUTIONARY AMYGDALA Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

110.737
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:217.7 nTPM
HPA Brain:347.4 nTPM
GTEx:217.7 nTPM
FANTOM5:212.9 Scaled Tags Per Million
Macaque:241.0 nTPM
Mouse:656.9 nTPM
Rat:463.9 nTPM
Pig:371.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079023
Amygdala mean intensity 110.737
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Nucleus of the lateral olfactory tract 67.114
Basal medial amygdaloid nucleus 82.243
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 62.090
Cortical amygdala 81.155
Central amygdala 80.645
Medial amygdaloid nucleus 77.767

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.4
Sample id Sample description nTPM
Basal amygdala
nTPM: 329.4
2110 Male, age 80, left hemisphere 415.1
2685 Female, age 94, left hemisphere 405.8
2243 Female, age 91, right hemisphere 398.4
1955 Male, age 76, both hemispheres 330.1
2827 Female, age 67, right hemisphere 217.3
2609 Male, age 75, right hemisphere 209.7
Central amygdala
nTPM: 347.4
2826 Female, age 94, left hemisphere 423.7
1905 Male, age 76, both hemispheres 416.1
2239 Male, age 80, left hemisphere 368.9
2701 Female, age 91, right hemisphere 290.7
2515 Male, age 75, right hemisphere 237.8
Corticomedial amygdala
nTPM: 315.8
2829 Male, age 80, left hemisphere 429.2
2242 Female, age 91, right hemisphere 368.8
2429 Female, age 94, left hemisphere 355.1
2240 Male, age 76, both hemispheres 305.9
2535 Female, age 67, right hemisphere 237.6
2428 Male, age 75, right hemisphere 198.1
Lateral amygdala
nTPM: 323.9
1883 Male, age 76, both hemispheres 464.3
2534 Female, age 94, left hemisphere 462.3
2255 Female, age 91, right hemisphere 305.8
2256 Male, age 80, left hemisphere 298.7
2516 Male, age 75, right hemisphere 219.7
2830 Female, age 67, right hemisphere 192.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

217.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 217.7
Samples: 181

Max nTPM: 620.7
Min nTPM: 80.6
Std nTPM: 94.3
Median nTPM: 206.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 620.7
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 550.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 529.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 417.2
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 413.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 412.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 412.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 411.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 394.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 387.0
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 368.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 367.6
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 361.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 353.5
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 350.4
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 348.7
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 347.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 346.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 346.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 343.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 339.5
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 332.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 330.9
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 321.5
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 321.2
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 315.3
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 314.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 314.4
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 314.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 311.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 310.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 308.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 306.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 306.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 303.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 301.1
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 298.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 297.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 293.8
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 291.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 289.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 286.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 285.1
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 282.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 281.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 279.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 279.6
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 278.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 269.9
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 269.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 263.4
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 259.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 255.4
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 254.4
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 251.4
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 249.8
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 248.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 246.4
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 246.1
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 242.1
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 237.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 236.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 235.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 230.5
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 229.4
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 227.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 227.3
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 227.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 225.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 222.6
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 221.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 219.9
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 219.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 219.7
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 215.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 215.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 214.1
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 213.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 210.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 210.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 209.4
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 209.2
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 208.7
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 208.6
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 208.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 207.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 207.6
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 206.8
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 206.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 206.1
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 206.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 205.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 200.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 200.0
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 197.2
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 196.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 195.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 195.3
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 194.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 193.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 193.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 192.2
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 187.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 186.5
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 184.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 182.8
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 180.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 178.9
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 178.7
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 175.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 172.2
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 171.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 167.2
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 164.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 163.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 163.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 163.1
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 161.9
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 161.6
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 160.0
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 158.8
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 158.7
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 156.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 156.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 156.3
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 154.8
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 154.7
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 152.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 151.6
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 151.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 149.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 147.8
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 147.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 146.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 146.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 146.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 145.3
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 143.8
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 140.9
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 139.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 139.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 138.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 138.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 137.8
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 136.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 135.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 134.7
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 133.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 133.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 132.8
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 130.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 129.9
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 129.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 125.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 123.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 122.3
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 122.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 122.0
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 121.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 121.4
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 120.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 119.3
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 117.8
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 116.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 115.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 114.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 111.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 109.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 109.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 109.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 107.3
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 100.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 98.9
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 95.5
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 91.6
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 90.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 89.0
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 86.5
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 82.2
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 80.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 80.6
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

212.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 212.9
FF:10151-102I7 76 years, female 212.9

AMYGDALA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

241.0
Macaque sample Sample description nTPM
Amygdala
nTPM: 241.0
Samples: 2

Max nTPM: 276.2
Min nTPM: 205.8
Sample A 205.8
Sample B 276.2

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.7
Pig sample Sample description nTPM
Amygdala
nTPM: 371.7
Samples: 4

Max nTPM: 544.1
Min nTPM: 243.8
Sample A Female 544.1
Sample B Female 243.8
Sample C Male 370.4
Sample D Male 328.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

656.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 656.9
Samples: 4

Max nTPM: 702.8
Min nTPM: 615.8
Sample A 669.7
Sample B 615.8
Sample C 702.8
Sample D 639.4

AMYGDALA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

463.9
Rat sample Sample description nTPM
Amygdala
nTPM: 463.9
Samples: 4

Max nTPM: 497.6
Min nTPM: 396.0
Sample A 497.6
Sample A 483.5
Sample A 478.4
Sample A 396.0

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