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BETA
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  • RPS15
EVOLUTIONARY MEDULLA OBLONGATA Show tissue menu
BRAIN28 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE12 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CORPUS CALLOSUM DORSAL ROOT GANGLION ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OLFACTORY BULB PONS RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM SOMATOSENSORY CORTEX SPINAL CORD THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES PERICARDIUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:631.2 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Mouse:602.9 nTPM
Rat:389.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

631.2
Sample id Sample description nTPM
Area postrema
nTPM: 591.5
2799 Male, age 61, both hemispheres 723.2
2306 Male, age 80, both hemispheres 661.8
2054 Male, age 76, both hemispheres 389.4
Dorsal medullary reticular nucleus
nTPM: 484.5
2373 Male, age 61, both hemispheres 495.8
2040 Female, age 85, both hemispheres 493.2
2088 Male, age 76, both hemispheres 464.6
Dorsal motor vagal complex
nTPM: 578.9
2797 Male, age 61, both hemispheres 781.1
2643 Male, age 74, both hemispheres 662.0
2000 Male, age 74, unknown 559.8
2813 Female, age 72, unknown 546.7
2185 Male, age 76, both hemispheres 542.1
2844 Male, age 55, unknown 533.5
2133 Female, age 91, both hemispheres 503.6
2807 Female, age 85, both hemispheres 502.3
Gigantocellular reticular nuclei, medullary
nTPM: 496.5
2314 Male, age 61, both hemispheres 661.5
2022 Male, age 76, right hemisphere 514.3
2310 Male, age 80, both hemispheres 502.0
1876 Female, age 85, both hemispheres 446.6
2462 Male, age 74, both hemispheres 433.7
2387 Female, age 91, both hemispheres 421.1
Gigantocellular reticular nuclei, pars
nTPM: 486.4
2084 Female, age 85, both hemispheres 508.1
2336 Male, age 61, both hemispheres 496.6
2168 Male, age 76, both hemispheres 494.6
2330 Male, age 80, both hemispheres 468.0
2706 Male, age 80, both hemispheres 464.6
Inferior olive
nTPM: 596.5
2563 Male, age 74, both hemispheres 671.7
2628 Female, age 91, both hemispheres 661.9
2178 Male, age 61, both hemispheres 608.4
2085 Female, age 85, both hemispheres 574.9
2379 Male, age 80, both hemispheres 465.6
Lateral medullary reticular nucleus
nTPM: 560.9
2852 Male, age 80, both hemispheres 646.7
2374 Male, age 61, both hemispheres 566.5
2804 Female, age 91, both hemispheres 565.8
2190 Female, age 85, both hemispheres 555.0
2305 Male, age 74, both hemispheres 524.3
2044 Male, age 76, both hemispheres 507.0
Medial olivary nucleus
nTPM: 613.5
1943 Male, age 61, both hemispheres 642.4
2138 Female, age 91, both hemispheres 617.9
1962 Male, age 76, both hemispheres 603.4
2851 Male, age 80, both hemispheres 590.1
Medial vestibular nucleus
nTPM: 503.4
2624 Male, age 61, both hemispheres 580.7
2801 Male, age 74, both hemispheres 525.4
2803 Female, age 91, both hemispheres 506.5
2093 Male, age 80, both hemispheres 504.1
2743 Female, age 85, both hemispheres 472.7
2134 Male, age 76, both hemispheres 430.8
Motor hypoglossal nucleus
nTPM: 539.0
2182 Male, age 80, both hemispheres 710.3
2132 Female, age 85, both hemispheres 561.3
2125 Female, age 91, both hemispheres 559.8
2461 Male, age 61, both hemispheres 446.8
2277 Male, age 76, both hemispheres 417.0
Nucleus ambiguus
nTPM: 585.9
2071 Male, age 76, both hemispheres 611.6
2096 Female, age 85, both hemispheres 560.2
Nucleus cuneatus
nTPM: 514.8
2564 Male, age 74, both hemispheres 608.3
2805 Female, age 91, both hemispheres 556.8
2562 Male, age 61, both hemispheres 552.4
2808 Female, age 85, both hemispheres 551.0
2380 Male, age 80, both hemispheres 515.6
2381 Male, age 80, both hemispheres 515.1
2376 Male, age 61, both hemispheres 470.5
2131 Male, age 76, both hemispheres 441.2
2100 Male, age 76, both hemispheres 422.4
Nucleus gracilis
nTPM: 631.2
2627 Male, age 74, both hemispheres 651.4
2382 Male, age 80, both hemispheres 629.0
2299 Female, age 85, both hemispheres 613.2
Nucleus raphe obscurus
nTPM: 580.6
2142 Male, age 76, midline 616.8
2845 Female, age 85, midline 579.0
2800 Male, age 61, midline 545.9
Nucleus raphe pallidus
nTPM: 586.0
1924 Male, age 61, midline 639.7
2183 Male, age 80, midline 580.0
2145 Male, age 76, midline 538.4
Nucleus tractus solitarii
nTPM: 418.6
2191 Female, age 85, both hemispheres 494.2
2656 Male, age 76, both hemispheres 439.1
2307 Male, age 80, both hemispheres 435.7
2144 Female, age 91, right hemisphere 305.4
Parvicellular reticular nuclei
nTPM: 507.2
2119 Male, age 80, both hemispheres 529.4
2095 Male, age 76, both hemispheres 525.5
2558 Male, age 74, both hemispheres 466.6
Parvicellular reticular nuclei, medullary
nTPM: 522.2
2189 Female, age 91, both hemispheres 548.2
2181 Male, age 80, left hemisphere 522.4
2091 Female, age 85, both hemispheres 496.1
Peritrigeminal nucleus
nTPM: 584.2
2067 Female, age 85, both hemispheres 687.6
2136 Male, age 76, both hemispheres 564.0
2179 Male, age 61, both hemispheres 500.9
Prepositus hypoglossal nucleus
nTPM: 522.7
2086 Male, age 80, both hemispheres 539.6
2855 Female, age 85, right hemisphere 505.9
Spinal trigeminal nucleus, caudal
nTPM: 539.0
2312 Male, age 61, both hemispheres 572.0
2308 Male, age 80, both hemispheres 570.7
2642 Male, age 74, both hemispheres 559.7
2390 Female, age 91, both hemispheres 499.2
2447 Male, age 76, both hemispheres 493.5
Spinal trigeminal nucleus, interpolar
nTPM: 514.5
2033 Male, age 80, both hemispheres 557.0
2066 Male, age 76, right hemisphere 533.8
2389 Female, age 91, both hemispheres 513.4
2625 Male, age 61, both hemispheres 497.7
2386 Female, age 85, both hemispheres 470.6
Spinal vestibular nucleus
nTPM: 565.5
2384 Male, age 74, both hemispheres 644.8
2780 Male, age 80, both hemispheres 615.6
2748 Male, age 76, both hemispheres 550.7
2186 Female, age 91, both hemispheres 532.5
2796 Male, age 61, both hemispheres 526.6
2806 Female, age 85, both hemispheres 522.8
Superior vestibular nucleus
nTPM: 557.5
2015 Male, age 80, both hemispheres 607.5
2061 Male, age 76, both hemispheres 540.2
2383 Male, age 74, both hemispheres 524.7
Ventral medullary reticular nucleus
nTPM: 516.3
2060 Male, age 76, both hemispheres 524.4
2372 Male, age 61, both hemispheres 508.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 565.9
2118 Male, age 80, both hemispheres 607.0
2302 Female, age 91, both hemispheres 593.4
1986 Male, age 76, both hemispheres 545.0
2741 Female, age 85, both hemispheres 542.5
2180 Male, age 61, both hemispheres 541.8

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 70.4
FF:10174-103C3 60 years, female 91.9
FF:10038-101F2 18-64 years, mixed 79.1
FF:10155-103A2 76 years, female 40.1

MEDULLA OBLONGATA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

602.9
Mouse sample Sample description nTPM
Medulla oblongata
nTPM: 602.9
Samples: 4

Max nTPM: 684.3
Min nTPM: 518.3
Sample A 684.3
Sample B 518.3
Sample C 607.0
Sample D 602.1

MEDULLA OBLONGATA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

389.7
Rat sample Sample description nTPM
Medulla oblongata
nTPM: 389.7
Samples: 4

Max nTPM: 435.3
Min nTPM: 339.0
Sample A 339.0
Sample A 384.9
Sample A 435.3
Sample A 399.4

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