HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:163.7 nTPM
HPA Brain:97.2 nTPM
GTEx:163.7 nTPM
FANTOM5:66.4 Scaled Tags Per Million
Pig:83.4 nTPM
Mouse:122.4 nTPM
Allen mouse:16.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 97.2
Sample id Sample description nTPM
Hippocampus
nTPM: 85.3
1898 Male, age 80, left hemisphere 112.4
2529 Female, age 94, left hemisphere 87.6
1911 Female, age 85, right hemisphere 79.7
1855 Male, age 76, left hemisphere 78.5
2148 Female, age 91, left hemisphere 77.4
2621 Female, age 67, right hemisphere 76.1
Dentate gyrus
nTPM: 87.3
2530 Female, age 94, left hemisphere 121.5
2528 Male, age 74, both hemispheres 94.1
2010 Male, age 76, both hemispheres 93.4
1927 Female, age 91, both hemispheres 82.8
2246 Female, age 85, both hemispheres 73.8
2531 Female, age 67, both hemispheres 58.0
Entorhinal gyrus
nTPM: 94.0
2764 Male, age 80, right hemisphere 121.1
2117 Female, age 91, right hemisphere 107.6
1787 Male, age 76, left hemisphere 95.1
1938 Female, age 85, left hemisphere 91.8
2613 Female, age 94, left hemisphere 82.8
2686 Male, age 75, right hemisphere 65.3
Hippocampus, CA1
nTPM: 92.7
2749 Male, age 80, left hemisphere 138.8
2527 Male, age 74, both hemispheres 109.0
2082 Female, age 91, right hemisphere 77.6
1873 Female, age 85, both hemispheres 76.8
2045 Male, age 76, both hemispheres 61.1
Hippocampus, CA2
nTPM: 97.2
2249 Male, age 74, both hemispheres 126.2
1963 Male, age 80, left hemisphere 123.9
1892 Male, age 76, both hemispheres 87.7
2437 Female, age 94, left hemisphere 87.7
1940 Female, age 85, left hemisphere 81.5
2113 Female, age 91, right hemisphere 76.5
Hippocampus, CA3
nTPM: 83.3
2436 Male, age 74, both hemispheres 114.5
2137 Male, age 80, left hemisphere 92.7
1867 Male, age 76, both hemispheres 88.0
1891 Female, age 85, both hemispheres 77.3
2620 Female, age 94, left hemisphere 76.8
2861 Female, age 67, both hemispheres 50.3
Parahippocampal cortex
nTPM: 75.3
1990 Female, age 91, right hemisphere 98.1
2532 Female, age 72, left hemisphere 89.1
1933 Female, age 85, both hemispheres 87.8
2245 Female, age 91, both hemispheres 84.4
1850 Male, age 80, both hemispheres 81.9
2250 Female, age 67, right hemisphere 78.5
2018 Male, age 76, both hemispheres 74.0
2692 Male, age 74, both hemispheres 60.9
2693 Female, age 94, both hemispheres 52.5
2622 Female, age 67, right hemisphere 46.1
Perirhinal gyrus
nTPM: 85.3
1794 Male, age 80, right hemisphere 111.5
1847 Female, age 91, left hemisphere 104.3
2521 Female, age 94, right hemisphere 76.7
1841 Female, age 85, right hemisphere 70.1
2848 Male, age 76, right hemisphere 63.8
Subiculum
nTPM: 91.0
1901 Male, age 80, both hemispheres 114.2
1977 Female, age 85, both hemispheres 113.4
2619 Male, age 74, both hemispheres 90.7
2042 Male, age 76, both hemispheres 81.8
2729 Female, age 91, right hemisphere 75.9
2438 Female, age 94, left hemisphere 70.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 163.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 163.7
Samples: 255

Max nTPM: 421.7
Min nTPM: 59.5
Std nTPM: 40.2
Median nTPM: 159.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 421.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 318.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 285.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 281.0
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 272.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 255.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 249.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 247.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 245.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 243.6
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 240.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.4
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 83.4
Pig sample Sample description nTPM
Subiculum
nTPM: 67.3
Samples: 4

Max nTPM: 91.2
Min nTPM: 54.6
Sample A Female 91.2
Sample B Female 61.8
Sample C Male 61.7
Sample D Male 54.6
Dorsal hippocampus
nTPM: 83.4
Samples: 4

Max nTPM: 112.1
Min nTPM: 57.8
Sample A Female 112.1
Sample B Female 79.2
Sample C Male 84.4
Sample D Male 57.8
Entorhinal cortex
nTPM: 75.9
Samples: 4

Max nTPM: 89.0
Min nTPM: 61.0
Sample A Female 74.6
Sample B Female 89.0
Sample C Male 78.9
Sample D Male 61.0
Ventral hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 100.9
Min nTPM: 54.0
Sample A Female 88.8
Sample B Female 54.0
Sample C Male 100.9
Sample D Male 76.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 122.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.1
Samples: 4

Max nTPM: 129.6
Min nTPM: 94.7
Sample A Male 128.8
Sample B Male 129.6
Sample C Female 115.3
Sample D Female 94.7
Hippocampal formation
nTPM: 122.4
Samples: 4

Max nTPM: 156.1
Min nTPM: 106.3
Sample A Male 106.3
Sample B Male 115.5
Sample C Female 111.7
Sample D Female 156.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
70526029 Antisense, RP_050317_04_H04, Mouse strain C57BL/6J (56 days, male) 16.6

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