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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:56.2 nTPM
HPA Brain:100.4 nTPM
GTEx:56.2 nTPM
Pig:49.7 nTPM
Mouse:106.2 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 48.8
1961 Female, age 42, unknown 51.0
2226 Male, age 75, left hemisphere 46.6
Dorsomedial nucleus
nTPM: 68.9
1989 Male, age 62, unknown 77.6
2017 Female, age 42, unknown 67.5
2041 Female, age 72, unknown 61.5
Lateral hypothalamic area
nTPM: 54.8
2271 Male, age 75, both hemispheres 78.5
1791 Male, age 80, right hemisphere 58.5
2412 Male, age 62, unknown 57.8
2228 Male, age 66, unknown 24.7
Mammillary body
nTPM: 69.0
1834 Female, age 42, unknown 79.7
1945 Male, age 80, right hemisphere 78.0
2413 Male, age 66, unknown 71.8
1923 Female, age 72, unknown 66.8
1948 Female, age 72, unknown 48.7
Paraventricular nucleus
nTPM: 53.7
2700 Male, age 62, unknown 53.7
Preoptic area
nTPM: 47.5
2414 Female, age 72, unknown 55.7
1861 Female, age 42, unknown 54.8
1907 Male, age 80, right hemisphere 31.9
Supraoptic nucleus
nTPM: 100.4
2043 Male, age 62, unknown 125.8
1894 Female, age 72, unknown 96.4
2835 Female, age 72, unknown 79.0
Ventromedial nucleus
nTPM: 52.0
1982 Female, age 72, unknown 54.6
1822 Female, age 42, unknown 49.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 56.2
Samples: 257

Max nTPM: 175.8
Min nTPM: 14.6
Std nTPM: 24.1
Median nTPM: 52.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 175.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 161.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 152.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 127.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 125.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 123.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 117.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 113.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 111.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 111.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 101.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 100.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 99.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 97.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 95.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 95.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 89.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 89.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 89.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 87.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 86.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 85.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 85.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 85.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 85.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 84.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 83.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 83.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 82.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 81.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 81.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 80.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 78.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 77.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 76.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 75.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 75.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 75.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 75.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 75.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 74.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 74.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 74.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 74.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 73.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 73.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 73.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 73.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 72.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 72.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 71.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 71.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 71.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 71.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 71.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 70.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 70.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 69.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 69.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 69.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 67.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 67.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 67.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 67.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 67.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 66.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 66.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 66.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 66.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 66.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 65.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 65.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 64.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 64.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 64.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 64.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 64.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 63.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 63.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 63.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 63.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 62.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 62.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 62.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 62.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 62.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 62.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 61.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 61.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 60.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 60.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 60.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 60.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 60.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 59.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 58.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 58.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 58.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 58.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 58.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 58.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 58.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 57.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 56.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 56.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 56.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 56.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 56.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 55.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 55.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 54.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 54.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 53.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 53.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 53.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 53.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 52.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 52.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 52.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 52.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 51.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 51.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 51.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 50.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 50.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 49.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 49.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 49.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 48.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 48.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 48.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 48.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 48.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 47.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 47.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 47.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 47.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 47.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 47.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 46.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 46.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 46.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 46.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 45.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 45.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 45.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 44.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 44.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 44.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 44.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 43.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 43.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 43.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 43.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 42.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 42.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 42.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 42.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 42.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 42.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 41.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 41.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 41.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 41.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 41.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 41.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 40.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 40.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 40.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 40.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 40.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 40.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 39.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 39.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 39.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 39.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 39.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 39.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 38.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 38.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 38.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 38.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 37.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 37.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 37.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 36.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 36.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 36.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 36.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 36.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 35.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 35.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 35.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 34.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 34.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 34.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 33.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 33.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 33.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 33.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 33.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 33.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 32.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 32.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 32.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 32.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 32.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 32.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 31.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 31.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 30.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 30.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 30.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 30.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 30.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 30.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 29.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 29.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 28.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 28.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 27.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 27.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 27.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 25.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 24.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 24.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 24.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 23.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 23.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 23.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 23.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 23.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 21.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 15.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 14.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 49.7
Samples: 4

Max nTPM: 55.6
Min nTPM: 44.8
Sample A Female 55.6
Sample B Female 47.6
Sample C Male 50.7
Sample D Male 44.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 106.1
Samples: 4

Max nTPM: 124.7
Min nTPM: 94.0
Sample A Male 94.0
Sample B Male 124.7
Sample C Female 98.2
Sample D Female 107.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.0
71836806 Antisense, RP_051017_02_A11, Mouse strain C57BL/6J (56 days, male) 1.6
413825 Antisense, RP_040809_01_G11, Mouse strain C57BL/6J (56 days, male) 0.3

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