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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:54.9 nTPM
HPA Brain:143.2 nTPM
GTEx:54.9 nTPM
Pig:98.3 nTPM
Mouse:65.1 nTPM
Allen mouse:4.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 90.1
2226 Male, age 75, left hemisphere 131.6
1961 Female, age 42, unknown 48.7
Dorsomedial nucleus
nTPM: 82.6
1989 Male, age 62, unknown 117.6
2017 Female, age 42, unknown 77.4
2041 Female, age 72, unknown 52.7
Lateral hypothalamic area
nTPM: 143.2
2271 Male, age 75, both hemispheres 252.4
2228 Male, age 66, unknown 116.9
1791 Male, age 80, right hemisphere 116.5
2412 Male, age 62, unknown 87.0
Mammillary body
nTPM: 99.4
1948 Female, age 72, unknown 111.6
2413 Male, age 66, unknown 111.4
1945 Male, age 80, right hemisphere 99.3
1834 Female, age 42, unknown 87.5
1923 Female, age 72, unknown 87.1
Paraventricular nucleus
nTPM: 65.0
2700 Male, age 62, unknown 65.0
Preoptic area
nTPM: 82.6
2414 Female, age 72, unknown 106.5
1861 Female, age 42, unknown 79.3
1907 Male, age 80, right hemisphere 61.9
Supraoptic nucleus
nTPM: 101.6
2043 Male, age 62, unknown 128.4
1894 Female, age 72, unknown 101.6
2835 Female, age 72, unknown 74.8
Ventromedial nucleus
nTPM: 76.6
1982 Female, age 72, unknown 96.8
1822 Female, age 42, unknown 56.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 54.9
Samples: 257

Max nTPM: 360.2
Min nTPM: 8.5
Std nTPM: 38.9
Median nTPM: 46.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 360.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 209.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 196.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 189.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 185.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 180.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 179.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 177.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 171.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 168.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 137.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 126.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 124.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 114.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 110.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 108.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 104.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 102.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 99.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 98.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 97.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 96.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 95.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 93.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 92.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 91.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 91.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 90.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 89.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 87.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 86.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 85.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 82.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 81.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 79.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 79.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 79.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 75.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 75.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 74.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 74.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 71.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 71.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 70.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 70.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 69.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 69.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 68.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 68.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 68.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 68.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 67.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 67.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 67.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 66.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 66.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 66.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 66.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 65.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 65.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 64.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 64.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 64.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 63.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 63.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 62.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 62.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 61.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 61.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 61.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 61.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 61.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 60.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 60.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 59.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 57.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 57.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 57.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 56.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 56.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 56.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 56.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 56.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 55.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 55.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 54.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 54.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 54.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 54.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 53.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 53.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 53.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 53.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 52.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 52.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 51.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 51.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 51.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 51.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 51.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 51.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 51.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 51.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 50.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 50.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 50.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 49.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 48.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 48.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 48.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 47.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 47.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 47.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 46.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 46.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 46.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 45.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 45.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 45.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 45.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 44.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 44.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 43.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 43.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 43.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 43.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 43.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 42.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 42.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 42.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 41.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 41.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 41.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 41.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 40.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 40.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 40.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 40.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 40.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 40.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 39.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 39.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 39.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 39.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 38.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 37.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 36.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 36.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 36.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 35.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 35.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 35.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 34.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 34.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 34.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 34.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 34.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 33.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 33.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 33.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 33.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 33.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 33.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 32.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 32.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 32.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 32.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 32.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 32.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 31.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 31.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 31.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 31.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 31.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 31.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 31.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 30.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 30.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 30.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 30.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 30.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 30.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 30.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 30.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 29.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 29.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 29.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 29.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 28.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 28.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 27.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 27.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 26.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 26.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 25.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 25.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 24.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 24.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 24.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 24.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 23.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 23.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 23.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 22.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 22.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 21.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 21.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 20.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 19.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 19.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 19.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 18.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 18.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 17.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 17.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 16.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 14.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 14.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 14.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 14.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 13.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 9.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 8.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 98.3
Samples: 4

Max nTPM: 125.2
Min nTPM: 73.7
Sample A Female 125.2
Sample B Female 105.6
Sample C Male 88.7
Sample D Male 73.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 65.1
Samples: 4

Max nTPM: 70.2
Min nTPM: 63.3
Sample A Male 63.3
Sample B Male 70.2
Sample C Female 63.3
Sample D Female 63.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.1
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 6.4
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 1.8

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