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BETA
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  • RNF19B
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:2.0 nTPM
Monaco:45.7 nTPM
Schmiedel:187.6 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

2.0
HPA sample nTPM
Classical monocyte
nTPM: 2.0
Samples: 6

Max nTPM: 2.5
Min nTPM: 1.3
P10809_1003 1.3
P10809_1020 1.9
P10809_1039 2.5
P10809_1058 2.0
P10809_1080 1.9
P10809_1107 2.5
Intermediate monocyte
nTPM: 1.9
Samples: 6

Max nTPM: 3.4
Min nTPM: 1.0
P10809_1004 1.5
P10809_1023 1.4
P10809_1042 2.1
P10809_1061 3.4
P10809_1081 2.0
P10809_1108 1.0
Non-classical monocyte
nTPM: 1.7
Samples: 5

Max nTPM: 2.9
Min nTPM: 0.4
P10809_1005 1.2
P10809_1053 1.8
P10809_1072 0.4
P10809_1082 2.3
P10809_1109 2.9

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

45.7
Monaco sample nTPM
Classical monocyte
nTPM: 45.7
Samples: 4

Max nTPM: 106.3
Min nTPM: 13.3
RHH5313_R3680 14.1
RHH5221_R3593 106.3
RHH5250_R3622 48.9
RHH5279_R3651 13.3
Intermediate monocyte
nTPM: 40.0
Samples: 4

Max nTPM: 80.8
Min nTPM: 5.1
RHH5314_R3681 9.5
RHH5222_R3594 64.7
RHH5251_R3623 80.8
RHH5280_R3652 5.1
Non-classical monocyte
nTPM: 14.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 8.5
RHH5315_R3682 10.2
RHH5223_R3595 17.8
RHH5252_R3624 19.7
RHH5281_R3653 8.5

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

187.6
Schmiedel sample id TPM
Classical monocyte
TPM: 187.6
Samples: 91

Max TPM: 389.6
Min TPM: 116.7
MONOCYTES_1 389.6
MONOCYTES_2 284.9
MONOCYTES_3 271.7
MONOCYTES_4 267.2
MONOCYTES_5 254.1
MONOCYTES_6 248.8
MONOCYTES_7 240.1
MONOCYTES_8 235.7
MONOCYTES_9 234.5
MONOCYTES_10 233.5
MONOCYTES_11 230.8
MONOCYTES_12 229.2
MONOCYTES_13 228.0
MONOCYTES_14 227.0
MONOCYTES_15 226.6
MONOCYTES_16 224.7
MONOCYTES_17 222.0
MONOCYTES_18 220.5
MONOCYTES_19 217.9
MONOCYTES_20 216.7
MONOCYTES_21 210.7
MONOCYTES_22 209.3
MONOCYTES_23 206.9
MONOCYTES_24 203.0
MONOCYTES_25 202.6
MONOCYTES_26 200.9
MONOCYTES_27 200.1
MONOCYTES_28 197.9
MONOCYTES_29 197.2
MONOCYTES_30 195.2
MONOCYTES_31 194.5
MONOCYTES_32 193.9
MONOCYTES_33 192.5
MONOCYTES_34 191.6
MONOCYTES_35 190.5
MONOCYTES_36 188.5
MONOCYTES_37 188.3
MONOCYTES_38 187.7
MONOCYTES_39 187.3
MONOCYTES_40 186.8
MONOCYTES_41 186.7
MONOCYTES_42 184.6
MONOCYTES_43 180.1
MONOCYTES_44 178.8
MONOCYTES_45 178.5
MONOCYTES_46 177.6
MONOCYTES_47 176.4
MONOCYTES_48 174.8
MONOCYTES_49 174.5
MONOCYTES_50 174.4
MONOCYTES_51 174.4
MONOCYTES_52 173.5
MONOCYTES_53 173.5
MONOCYTES_54 173.4
MONOCYTES_55 173.1
MONOCYTES_56 172.2
MONOCYTES_57 171.9
MONOCYTES_58 171.7
MONOCYTES_59 169.9
MONOCYTES_60 168.9
MONOCYTES_61 168.5
MONOCYTES_62 168.5
MONOCYTES_63 168.5
MONOCYTES_64 166.9
MONOCYTES_65 166.1
MONOCYTES_66 163.8
MONOCYTES_67 163.2
MONOCYTES_68 162.8
MONOCYTES_69 162.5
MONOCYTES_70 161.9
MONOCYTES_71 161.4
MONOCYTES_72 159.2
MONOCYTES_73 159.1
MONOCYTES_74 157.7
MONOCYTES_75 156.9
MONOCYTES_76 156.4
MONOCYTES_77 156.3
MONOCYTES_78 156.2
MONOCYTES_79 155.3
MONOCYTES_80 152.1
MONOCYTES_81 151.3
MONOCYTES_82 149.9
MONOCYTES_83 143.5
MONOCYTES_84 143.4
MONOCYTES_85 142.7
MONOCYTES_86 142.0
MONOCYTES_87 138.5
MONOCYTES_88 130.9
MONOCYTES_89 128.6
MONOCYTES_90 123.5
MONOCYTES_91 116.7
Show allShow less
Non-classical monocyte
TPM: 116.8
Samples: 90

Max TPM: 156.6
Min TPM: 78.0
M2_1 156.6
M2_2 154.6
M2_3 150.1
M2_4 146.5
M2_5 145.3
M2_6 141.7
M2_7 141.5
M2_8 137.3
M2_9 136.3
M2_10 135.1
M2_11 135.0
M2_12 134.2
M2_13 132.3
M2_14 130.1
M2_15 130.1
M2_16 129.4
M2_17 129.0
M2_18 129.0
M2_19 128.8
M2_20 128.8
M2_21 128.5
M2_22 128.4
M2_23 127.6
M2_24 125.8
M2_25 125.4
M2_26 125.2
M2_27 125.1
M2_28 124.3
M2_29 123.6
M2_30 123.3
M2_31 121.9
M2_32 121.5
M2_33 121.3
M2_34 121.3
M2_35 120.1
M2_36 119.5
M2_37 118.6
M2_38 118.4
M2_39 118.0
M2_40 117.8
M2_41 117.1
M2_42 116.9
M2_43 116.8
M2_44 116.6
M2_45 116.0
M2_46 115.7
M2_47 115.4
M2_48 114.5
M2_49 113.8
M2_50 113.6
M2_51 112.7
M2_52 111.8
M2_53 111.8
M2_54 111.3
M2_55 111.3
M2_56 110.7
M2_57 110.7
M2_58 109.8
M2_59 109.7
M2_60 109.7
M2_61 109.6
M2_62 108.7
M2_63 108.3
M2_64 108.1
M2_65 107.7
M2_66 107.6
M2_67 107.0
M2_68 106.9
M2_69 106.5
M2_70 106.0
M2_71 105.4
M2_72 104.7
M2_73 104.3
M2_74 103.9
M2_75 103.8
M2_76 103.3
M2_77 103.2
M2_78 99.7
M2_79 98.8
M2_80 98.3
M2_81 98.2
M2_82 98.0
M2_83 97.9
M2_84 97.7
M2_85 96.2
M2_86 95.4
M2_87 93.1
M2_88 92.2
M2_89 87.5
M2_90 78.0
Show allShow less

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