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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • FBXO2
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:233.9 nTPM
HPA Brain:213.9 nTPM
GTEx:233.9 nTPM
FANTOM5:91.5 Scaled Tags Per Million
Macaque:132.7 nTPM
Mouse:112.2 nTPM
Rat:185.9 nTPM
Pig:64.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 45253
Sample Intensity
Spinal cord_01
25304
Spinal cord_02
23813
Spinal cord_03
92803
Spinal cord_04
56844
Spinal cord_05
32279
Spinal cord_06
85597
Spinal cord_07
43206
Spinal cord_08
47299

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.9
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 206.7
2819 Male, age 47, both hemispheres 214.6
2818 Female, age 79, both hemispheres 205.9
2734 Male, age 80, both hemispheres 203.2
2193 Male, age 75, both hemispheres 203.1
Cervical spinal cord, central gray
nTPM: 186.3
2194 Female, age 79, both hemispheres 202.1
2816 Male, age 47, midline 193.7
1981 Female, age 72, midline 190.8
2565 Male, age 75, midline 182.2
2048 Male, age 55, midline 162.8
Cervical spinal cord, dorsal horn
nTPM: 165.3
2296 Male, age 66, both hemispheres 223.4
2173 Female, age 72, unknown 205.3
2721 Male, age 90, both hemispheres 179.2
1877 Male, age 55, unknown 153.6
2069 Male, age 47, both hemispheres 148.2
2297 Male, age 75, both hemispheres 82.4
Cervical spinal cord, ventral horn
nTPM: 159.2
2098 Female, age 72, unknown 211.8
2809 Male, age 90, both hemispheres 182.2
2820 Female, age 79, both hemispheres 165.3
2068 Male, age 55, unknown 151.1
2295 Male, age 66, both hemispheres 130.9
2480 Male, age 75, both hemispheres 113.9
Dorsal funiculus (white matter)
nTPM: 213.9
2064 Female, age 79, both hemispheres 263.9
2812 Male, age 66, both hemispheres 222.1
2128 Male, age 75, both hemispheres 212.9
2817 Male, age 47, both hemispheres 208.0
2810 Male, age 90, both hemispheres 162.5
Lateral funiculus (white matter)
nTPM: 186.1
2094 Female, age 79, both hemispheres 237.4
2192 Male, age 75, both hemispheres 180.5
2099 Male, age 90, both hemispheres 179.9
2294 Male, age 66, both hemispheres 146.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

233.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 233.9
Samples: 204

Max nTPM: 510.8
Min nTPM: 77.2
Std nTPM: 81.2
Median nTPM: 219.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 510.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 505.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 493.5
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 485.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 481.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 430.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 405.1
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 391.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 381.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 379.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 373.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 360.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 353.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 349.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 343.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 341.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 341.6
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 335.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 334.3
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 332.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 330.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 329.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 328.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 327.5
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 323.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 322.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 321.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 321.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 320.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 320.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 320.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 320.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 316.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 316.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 312.4
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 309.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 303.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 300.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 300.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 300.4
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 299.9
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 298.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 298.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 297.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 294.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 293.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 292.6
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 291.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 286.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 285.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 285.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 284.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 283.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 283.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 282.4
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 280.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 279.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 277.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 277.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 276.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 274.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 269.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 266.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 266.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 265.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 265.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 263.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 262.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 262.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 261.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 260.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 258.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 258.6
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 257.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 255.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 253.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 252.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 251.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 251.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 251.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 250.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 250.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 248.3
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 243.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 242.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 242.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 238.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 236.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 236.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 235.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 235.1
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 233.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 231.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 231.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 230.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 229.0
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 226.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 226.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 225.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 224.4
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 221.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 220.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 218.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 217.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 217.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 217.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 217.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 216.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 215.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 214.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 214.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 214.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 213.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 213.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 209.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 208.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 206.8
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 203.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 203.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 202.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 201.0
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 199.7
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 198.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 197.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 196.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 194.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 194.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 193.9
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 193.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 192.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 191.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 191.3
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 191.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 189.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 189.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 189.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 188.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 186.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 186.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 185.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 185.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 184.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 184.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 183.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 181.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 180.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 179.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 178.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 175.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 175.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 174.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 172.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 171.4
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 170.9
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 170.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 169.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 169.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 168.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 168.1
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 166.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 165.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 165.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 165.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 164.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 164.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 163.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 163.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 161.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 158.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 156.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 154.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 152.9
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 152.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 151.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 149.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 149.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 147.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 147.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 146.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 146.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 145.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 143.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 140.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 140.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 140.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 140.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 140.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 139.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 139.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 134.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 133.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 132.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 132.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 129.6
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 127.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 120.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 120.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 119.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 117.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 114.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 107.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 91.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 80.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 77.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

91.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 91.5
FF:10181-103D1 60 years, female 95.3
FF:10159-103A6 76 years, female 87.7

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.7
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 49.2
Samples: 2

Max nTPM: 84.7
Min nTPM: 13.6
Sample A 13.6
Sample B 84.7
Ventral spinal cord
nTPM: 132.7
Samples: 1

Max nTPM: 132.7
Min nTPM: 132.7
Sample A 132.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 34.5
Samples: 4

Max nTPM: 53.7
Min nTPM: 14.6
Sample A Female 51.0
Sample B Female 18.7
Sample C Male 14.6
Sample D Male 53.7
Ventral spinal cord
nTPM: 64.2
Samples: 4

Max nTPM: 82.7
Min nTPM: 34.5
Sample A Female 66.4
Sample B Female 82.7
Sample C Male 73.2
Sample D Male 34.5

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
Mouse sample Sample description nTPM
Spinal cord
nTPM: 112.2
Samples: 4

Max nTPM: 139.0
Min nTPM: 99.0
Sample A 99.0
Sample B 139.0
Sample C 103.0
Sample D 107.9

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

185.9
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 185.9
Samples: 4

Max nTPM: 202.9
Min nTPM: 159.2
Sample A 186.3
Sample A 202.9
Sample A 195.3
Sample A 159.2

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