HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:124.7 nTPM
HPA Brain:145.1 nTPM
GTEx:124.7 nTPM
FANTOM5:499.5 Scaled Tags Per Million
Pig:225.4 nTPM
Mouse:99.9 nTPM
Allen mouse:3.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051237Antibody CAB009849
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 145.1
Sample id Sample description nTPM
Hippocampus
nTPM: 145.1
2529 Female, age 94, left hemisphere 169.0
1855 Male, age 76, left hemisphere 157.5
1898 Male, age 80, left hemisphere 150.7
2148 Female, age 91, left hemisphere 141.8
1911 Female, age 85, right hemisphere 134.9
2621 Female, age 67, right hemisphere 116.6
Dentate gyrus
nTPM: 122.0
2010 Male, age 76, both hemispheres 159.3
2528 Male, age 74, both hemispheres 143.0
2246 Female, age 85, both hemispheres 134.4
1927 Female, age 91, both hemispheres 105.0
2530 Female, age 94, left hemisphere 103.8
2531 Female, age 67, both hemispheres 86.2
Entorhinal gyrus
nTPM: 114.8
2117 Female, age 91, right hemisphere 177.6
1787 Male, age 76, left hemisphere 137.5
1938 Female, age 85, left hemisphere 125.3
2686 Male, age 75, right hemisphere 106.5
2764 Male, age 80, right hemisphere 78.5
2613 Female, age 94, left hemisphere 63.0
Hippocampus, CA1
nTPM: 125.6
2527 Male, age 74, both hemispheres 168.6
1873 Female, age 85, both hemispheres 124.6
2082 Female, age 91, right hemisphere 123.8
2045 Male, age 76, both hemispheres 114.3
2749 Male, age 80, left hemisphere 96.9
Hippocampus, CA2
nTPM: 124.5
2249 Male, age 74, both hemispheres 193.8
1940 Female, age 85, left hemisphere 144.5
2113 Female, age 91, right hemisphere 132.5
2437 Female, age 94, left hemisphere 105.2
1963 Male, age 80, left hemisphere 88.6
1892 Male, age 76, both hemispheres 82.5
Hippocampus, CA3
nTPM: 114.0
2436 Male, age 74, both hemispheres 172.2
1891 Female, age 85, both hemispheres 128.7
1867 Male, age 76, both hemispheres 107.1
2137 Male, age 80, left hemisphere 103.4
2620 Female, age 94, left hemisphere 96.5
2861 Female, age 67, both hemispheres 75.9
Parahippocampal cortex
nTPM: 116.3
2250 Female, age 67, right hemisphere 187.6
2018 Male, age 76, both hemispheres 129.1
1933 Female, age 85, both hemispheres 124.7
2692 Male, age 74, both hemispheres 117.4
2245 Female, age 91, both hemispheres 110.6
1990 Female, age 91, right hemisphere 110.3
1850 Male, age 80, both hemispheres 102.2
2622 Female, age 67, right hemisphere 96.1
2532 Female, age 72, left hemisphere 92.4
2693 Female, age 94, both hemispheres 92.4
Perirhinal gyrus
nTPM: 104.2
2521 Female, age 94, right hemisphere 114.1
1841 Female, age 85, right hemisphere 112.3
1847 Female, age 91, left hemisphere 112.1
1794 Male, age 80, right hemisphere 95.2
2848 Male, age 76, right hemisphere 87.5
Subiculum
nTPM: 125.8
2729 Female, age 91, right hemisphere 165.6
2042 Male, age 76, both hemispheres 132.8
2619 Male, age 74, both hemispheres 131.4
2438 Female, age 94, left hemisphere 112.8
1901 Male, age 80, both hemispheres 109.4
1977 Female, age 85, both hemispheres 102.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 124.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 124.7
Samples: 255

Max nTPM: 442.4
Min nTPM: 50.4
Std nTPM: 59.5
Median nTPM: 110.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 442.4
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 440.8
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 369.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 336.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 304.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 300.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 294.2
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 283.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 281.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 280.9
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 273.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 499.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 499.5
FF:10169-103B7 60 years, female 522.4
FF:10153-102I9 76 years, female 476.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 225.4
Pig sample Sample description nTPM
Subiculum
nTPM: 202.7
Samples: 4

Max nTPM: 236.1
Min nTPM: 177.7
Sample A Female 236.1
Sample B Female 211.8
Sample C Male 185.0
Sample D Male 177.7
Dorsal hippocampus
nTPM: 225.4
Samples: 4

Max nTPM: 295.8
Min nTPM: 168.4
Sample A Female 295.8
Sample B Female 181.7
Sample C Male 255.7
Sample D Male 168.4
Entorhinal cortex
nTPM: 142.4
Samples: 4

Max nTPM: 166.5
Min nTPM: 109.6
Sample A Female 142.4
Sample B Female 151.2
Sample C Male 166.5
Sample D Male 109.6
Ventral hippocampus
nTPM: 220.5
Samples: 4

Max nTPM: 262.9
Min nTPM: 188.2
Sample A Female 234.3
Sample B Female 188.2
Sample C Male 262.9
Sample D Male 196.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 99.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 77.0
Samples: 4

Max nTPM: 88.4
Min nTPM: 69.9
Sample A Male 79.6
Sample B Male 69.9
Sample C Female 88.4
Sample D Female 69.9
Hippocampal formation
nTPM: 99.9
Samples: 4

Max nTPM: 107.9
Min nTPM: 93.4
Sample A Male 99.8
Sample B Male 93.4
Sample C Female 98.6
Sample D Female 107.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
74822928 Antisense, RP_060321_01_A01, Mouse strain C57BL/6J (56 days, male) 3.5

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