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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:130.4 nTPM
HPA Brain:231.0 nTPM
GTEx:130.4 nTPM
Pig:230.7 nTPM
Mouse:84.1 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 135.5
2226 Male, age 75, left hemisphere 157.9
1961 Female, age 42, unknown 113.1
Dorsomedial nucleus
nTPM: 129.7
1989 Male, age 62, unknown 132.0
2017 Female, age 42, unknown 131.9
2041 Female, age 72, unknown 125.2
Lateral hypothalamic area
nTPM: 148.6
1791 Male, age 80, right hemisphere 233.4
2228 Male, age 66, unknown 127.6
2271 Male, age 75, both hemispheres 126.3
2412 Male, age 62, unknown 106.9
Mammillary body
nTPM: 149.2
1923 Female, age 72, unknown 163.1
1834 Female, age 42, unknown 158.8
2413 Male, age 66, unknown 156.1
1945 Male, age 80, right hemisphere 146.5
1948 Female, age 72, unknown 121.3
Paraventricular nucleus
nTPM: 117.7
2700 Male, age 62, unknown 117.7
Preoptic area
nTPM: 150.4
1907 Male, age 80, right hemisphere 195.1
1861 Female, age 42, unknown 145.4
2414 Female, age 72, unknown 110.7
Supraoptic nucleus
nTPM: 231.0
1894 Female, age 72, unknown 292.4
2043 Male, age 62, unknown 261.9
2835 Female, age 72, unknown 138.6
Ventromedial nucleus
nTPM: 110.5
1822 Female, age 42, unknown 119.3
1982 Female, age 72, unknown 101.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 130.4
Samples: 257

Max nTPM: 556.5
Min nTPM: 32.5
Std nTPM: 73.8
Median nTPM: 109.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 556.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 493.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 392.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 390.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 385.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 369.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 365.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 326.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 310.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 305.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 294.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 288.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 287.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 275.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 248.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 239.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 238.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 237.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 231.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 229.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 225.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 223.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 223.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 222.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 222.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 221.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 215.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 215.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 214.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 209.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 209.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 204.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 199.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 199.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 198.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 197.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 196.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 196.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 191.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 189.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 189.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 189.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 188.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 187.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 186.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 182.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 181.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 181.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 180.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 172.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 170.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 169.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 167.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 165.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 163.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 161.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 155.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 154.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 154.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 153.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 149.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 149.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 149.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 149.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 148.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 146.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 146.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 145.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 145.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 144.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 143.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 142.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 140.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 139.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 138.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 138.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 137.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 137.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 135.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 134.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 134.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 133.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 132.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 132.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 131.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 131.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 130.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 130.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 130.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 129.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 129.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 128.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 128.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 128.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 127.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 127.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 126.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 125.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 125.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 125.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 125.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 124.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 123.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 122.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 121.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 121.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 120.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 119.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 119.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 118.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 118.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 117.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 116.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 115.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 115.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 115.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 115.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 114.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 114.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 114.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 113.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 113.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 112.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 112.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 110.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 110.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 110.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 109.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 109.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 109.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 108.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 108.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 108.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 108.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 108.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 107.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 107.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 107.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 107.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 106.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 106.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 105.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 105.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 105.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 105.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 104.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 104.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 104.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 104.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 103.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 103.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 102.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 102.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 101.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 101.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 101.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 101.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 101.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 99.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 99.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 99.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 98.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 98.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 98.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 97.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 96.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 96.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 95.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 95.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 95.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 94.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 94.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 94.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 93.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 91.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 91.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 90.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 90.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 89.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 89.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 88.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 88.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 87.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 87.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 87.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 83.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 83.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 82.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 82.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 82.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 82.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 81.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 81.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 81.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 80.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 80.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 80.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 79.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 79.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 79.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 78.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 78.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 78.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 78.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 77.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 76.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 76.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 76.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 75.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 75.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 75.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 75.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 74.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 74.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 73.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 73.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 73.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 73.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 73.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 73.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 72.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 72.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 71.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 71.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 71.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 70.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 70.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 70.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 69.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 69.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 68.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 67.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 65.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 64.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 63.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 61.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 61.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 60.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 60.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 59.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 58.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 58.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 55.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 54.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 53.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 51.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 51.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 50.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 49.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 48.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 47.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 46.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 32.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 230.7
Samples: 4

Max nTPM: 256.4
Min nTPM: 184.1
Sample A Female 256.4
Sample B Female 244.5
Sample C Male 237.7
Sample D Male 184.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 84.1
Samples: 4

Max nTPM: 86.8
Min nTPM: 79.6
Sample A Male 79.6
Sample B Male 86.7
Sample C Female 83.3
Sample D Female 86.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.0
74822928 Antisense, RP_060321_01_A01, Mouse strain C57BL/6J (56 days, male) 1.0

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