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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • RCN2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

161.961
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:63.7 nTPM
HPA Brain:75.7 nTPM
GTEx:63.7 nTPM
Pig:57.7 nTPM
Mouse:241.5 nTPM
Allen mouse:14.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA030694
Hypothalamus mean intensity 161.961
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 105.549
Mammillary nucleus 31.236
Periventricular hypothalamic nucleus 133.905
Supraoptic nucleus 151.856
Tuberal nucleus 62.518
Ventral tuberomammillary nucleus 47.211
Lateral preoptic area 102.907
Medial preoptic area 67.582
Suprachiasmatic nucleus 140.457
Paraventricular hypothalamic nucleus 140.562
Anterior hypothalamic area, central 127.392
Ventral medial hypothalamic nucleus 119.416
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 113.674
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 100.922
Dorsal medial hypothalamic nucleus 125.571
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 75.7
2226 Male, age 75, left hemisphere 88.1
1961 Female, age 42, unknown 63.3
Dorsomedial nucleus
nTPM: 58.7
2041 Female, age 72, unknown 74.4
1989 Male, age 62, unknown 50.8
2017 Female, age 42, unknown 50.8
Lateral hypothalamic area
nTPM: 60.1
1791 Male, age 80, right hemisphere 65.8
2228 Male, age 66, unknown 65.8
2412 Male, age 62, unknown 55.6
2271 Male, age 75, both hemispheres 53.4
Mammillary body
nTPM: 46.2
1923 Female, age 72, unknown 55.9
1945 Male, age 80, right hemisphere 47.7
1948 Female, age 72, unknown 46.7
2413 Male, age 66, unknown 46.7
1834 Female, age 42, unknown 34.0
Paraventricular nucleus
nTPM: 50.4
2700 Male, age 62, unknown 50.4
Preoptic area
nTPM: 57.6
1907 Male, age 80, right hemisphere 74.5
1861 Female, age 42, unknown 51.6
2414 Female, age 72, unknown 46.8
Supraoptic nucleus
nTPM: 51.4
1894 Female, age 72, unknown 58.8
2835 Female, age 72, unknown 49.2
2043 Male, age 62, unknown 46.3
Ventromedial nucleus
nTPM: 67.0
1982 Female, age 72, unknown 71.8
1822 Female, age 42, unknown 62.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 63.7
Samples: 257

Max nTPM: 138.5
Min nTPM: 22.7
Std nTPM: 22.1
Median nTPM: 62.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 138.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 138.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 130.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 128.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 115.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 112.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 110.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 109.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 105.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 104.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 104.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 101.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 100.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 100.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 99.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 98.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 97.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 96.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 96.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 95.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 95.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 95.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 94.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 92.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 91.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 91.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 91.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 90.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 90.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 89.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 89.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 89.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 89.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 88.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 88.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 88.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 87.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 87.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 86.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 86.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 85.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 85.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 84.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 84.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 83.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 82.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 82.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 82.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 81.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 81.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 81.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 80.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 80.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 79.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 79.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 79.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 79.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 79.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 79.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 79.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 79.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 79.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 78.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 77.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 77.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 77.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 77.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 76.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 76.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 75.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 75.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 75.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 74.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 74.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 74.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 74.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 74.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 73.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 73.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 73.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 73.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 73.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 73.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 72.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 72.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 72.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 72.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 70.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 70.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 70.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 69.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 69.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 69.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 68.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 67.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 67.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 67.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 67.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 67.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 67.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 67.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 66.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 66.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 66.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 66.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 66.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 66.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 66.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 65.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 65.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 65.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 65.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 65.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 65.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 65.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 65.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 64.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 64.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 64.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 63.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 63.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 62.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 62.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 62.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 62.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 62.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 62.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 62.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 62.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 62.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 61.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 61.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 60.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 59.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 59.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 59.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 58.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 58.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 57.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 57.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 57.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 56.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 56.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 56.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 55.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 55.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 55.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 55.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 55.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 55.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 54.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 54.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 54.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 54.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 54.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 53.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 53.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 53.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 53.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 52.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 52.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 52.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 52.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 52.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 51.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 51.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 51.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 51.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 50.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 50.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 50.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 50.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 49.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 49.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 49.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 49.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 49.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 49.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 49.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 48.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 48.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 48.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 47.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 47.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 47.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 46.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 46.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 45.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 45.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 45.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 45.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 45.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 45.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 44.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 44.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 44.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 43.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 43.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 43.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 43.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 43.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 42.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 42.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 42.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 42.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 42.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 41.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 41.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 41.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 41.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 40.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 40.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 39.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 38.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 37.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 37.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 36.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 36.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 36.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 36.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 35.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 34.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 34.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 33.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 33.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 33.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 33.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 32.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 32.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 32.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 31.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 30.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 28.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 27.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 26.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 25.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 25.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 24.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 22.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 22.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 22.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 57.8
Samples: 4

Max nTPM: 63.1
Min nTPM: 51.0
Sample A Female 63.1
Sample B Female 55.9
Sample C Male 51.0
Sample D Male 61.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

241.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 241.5
Samples: 4

Max nTPM: 275.6
Min nTPM: 220.3
Sample A Male 226.9
Sample B Male 275.6
Sample C Female 243.3
Sample D Female 220.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.2
69816774 Antisense, RP_050510_01_H01, Mouse strain C57BL/6J (56 days, male) 16.2
73997151 Antisense, RP_051214_03_F10, Mouse strain C57BL/6J (56 days, male) 12.2

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