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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • CTSD
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:239.4 nTPM
GTEx:151.8 nTPM
FANTOM5:165.8 Scaled Tags Per Million
Macaque:108.2 nTPM
Pig:146.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.4
Sample id Sample description nTPM
Putamen
nTPM: 239.4
2482 Female, age 94, left hemisphere 347.4
2466 Female, age 79, unknown 302.3
1829 Male, age 74, unknown 240.4
1937 Female, age 91, right hemisphere 232.6
2489 Female, age 72, unknown 206.8
1838 Male, age 80, right hemisphere 189.7
2647 Male, age 75, left hemisphere 156.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 151.8
Samples: 254

Max nTPM: 448.4
Min nTPM: 55.3
Std nTPM: 51.1
Median nTPM: 147.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 448.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 355.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 314.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 302.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 292.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 291.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 273.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 248.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 241.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 241.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 240.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 239.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 238.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 238.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 228.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 228.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 227.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 227.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 222.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 221.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 218.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 216.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 213.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 213.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 212.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 211.6
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 208.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 207.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 205.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 202.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 201.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 201.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 201.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 201.0
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 200.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 200.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 200.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 199.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 196.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 195.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 195.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 194.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 194.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 193.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 193.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 190.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 189.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 188.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 186.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 185.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 184.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 184.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 184.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 184.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 183.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 182.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 181.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 181.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 180.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 180.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 179.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 179.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 178.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 178.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 177.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 177.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 176.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 175.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 175.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 175.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 174.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 174.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 174.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 174.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 174.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 174.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 171.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 169.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 167.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 167.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 166.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 165.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 165.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 165.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 164.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 164.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 164.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 163.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 163.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 163.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 162.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 162.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 162.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 161.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 161.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 161.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 160.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 158.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 158.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 157.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 157.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 156.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 156.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 155.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 155.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 155.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 154.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 154.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 154.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 154.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 152.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 152.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 151.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 151.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 150.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 149.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 149.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 148.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 148.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 148.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 148.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 148.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 147.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 147.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 147.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 147.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 147.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 147.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 147.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 146.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 146.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 146.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 146.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 145.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 145.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 144.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 144.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 144.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 143.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 143.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 142.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 142.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 141.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 141.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 141.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 140.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 140.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 140.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 140.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 139.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 139.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 139.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 139.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 138.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 137.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 137.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 137.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 137.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 136.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 135.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 134.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 132.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 131.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 131.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 131.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 131.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 129.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 129.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 128.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 128.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 128.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 128.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 127.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 127.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 125.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 124.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 124.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 123.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 122.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 122.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 122.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 121.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 121.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 121.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 121.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 120.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 119.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 119.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 119.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 119.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 118.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 117.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 116.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 116.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 115.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 115.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 114.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 114.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 114.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 114.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 114.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 113.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 113.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 113.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 112.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 111.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 111.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 110.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 107.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 107.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 106.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 104.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 103.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 101.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 101.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 100.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 99.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 97.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 96.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 95.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 94.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 94.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 92.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 92.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 91.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 90.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 90.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 89.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 89.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 89.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 87.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 85.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 85.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 85.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 83.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 80.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 80.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 78.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 74.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 74.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 73.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 73.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 73.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 72.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 70.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 68.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 68.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 64.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 61.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 55.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

165.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 165.8
FF:10176-103C5 60 years, female 165.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.2
Macaque sample Sample description nTPM
Putamen
nTPM: 108.3
Samples: 2

Max nTPM: 108.7
Min nTPM: 107.8
Sample A 107.8
Sample B 108.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.5
Pig sample Sample description nTPM
Putamen
nTPM: 146.5
Samples: 3

Max nTPM: 176.6
Min nTPM: 113.1
Sample B Female 113.1
Sample C Male 149.7
Sample D Male 176.6

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