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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.8
nTPM
Monaco:
61.5
nTPM
Schmiedel:
16.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.8
HPA sample
nTPM
gdT-cell nTPM: 41.5
Samples: 6
Max nTPM: 49.0
Min nTPM: 31.8
P10809_1007
31.8
P10809_1022
41.0
P10809_1041
47.2
P10809_1060
45.6
P10809_1077
34.1
P10809_1098
49.0
MAIT T-cell nTPM: 33.6
Samples: 6
Max nTPM: 43.3
Min nTPM: 28.8
P10809_1006
30.3
P10809_1024
31.5
P10809_1043
43.3
P10809_1062
34.3
P10809_1083
33.4
P10809_1097
28.8
Memory CD4 T-cell nTPM: 38.0
Samples: 6
Max nTPM: 43.5
Min nTPM: 34.6
P10809_1014
34.8
P10809_1026
42.1
P10809_1045
35.1
P10809_1064
37.8
P10809_1086
34.6
P10809_1113
43.5
Memory CD8 T-cell nTPM: 35.7
Samples: 5
Max nTPM: 40.3
Min nTPM: 31.5
P10809_1012
35.4
P10809_1027
31.5
P10809_1046
38.6
P10809_1065
32.9
P10809_1111
40.3
Naive CD4 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 45.6
Min nTPM: 25.5
P10809_1015
25.5
P10809_1030
38.6
P10809_1049
45.6
P10809_1068
36.6
P10809_1085
40.0
P10809_1112
44.1
Naive CD8 T-cell nTPM: 31.0
Samples: 6
Max nTPM: 37.9
Min nTPM: 25.2
P10809_1016
25.2
P10809_1031
29.8
P10809_1050
26.9
P10809_1069
37.9
P10809_1087
30.6
P10809_1110
35.7
T-reg nTPM: 52.8
Samples: 6
Max nTPM: 77.8
Min nTPM: 33.9
P10809_1018
46.9
P10809_1037
48.3
P10809_1056
77.8
P10809_1075
33.9
P10809_1094
60.5
P10809_1106
49.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 43.4
Samples: 4
Max nTPM: 54.2
Min nTPM: 33.4
RHH5202_R3573
38.8
RHH5230_R3602
47.0
RHH5259_R3631
33.4
RHH5288_R3660
54.2
Effector memory CD8 T-cell nTPM: 48.8
Samples: 4
Max nTPM: 54.5
Min nTPM: 44.2
RHH5203_R3574
44.2
RHH5231_R3603
51.8
RHH5260_R3632
44.7
RHH5289_R3661
54.5
MAIT T-cell nTPM: 49.6
Samples: 4
Max nTPM: 57.6
Min nTPM: 40.8
RHH5233_R3605
49.8
RHH5205_R3576
40.8
RHH5262_R3634
50.2
RHH5297_R3663
57.6
Memory CD4 T-cell TFH nTPM: 52.3
Samples: 4
Max nTPM: 58.3
Min nTPM: 39.8
RHH5300_R3666
54.4
RHH5236_R3608
56.6
RHH5265_R3637
58.3
RHH5208_R3579
39.8
Memory CD4 T-cell Th1 nTPM: 50.5
Samples: 4
Max nTPM: 71.0
Min nTPM: 40.8
RHH5210_R3581
42.7
RHH5302_R3668
71.0
RHH5238_R3610
40.8
RHH5267_R3639
47.6
Memory CD4 T-cell Th1/Th17 nTPM: 54.4
Samples: 4
Max nTPM: 71.0
Min nTPM: 33.2
RHH5303_R3669
71.0
RHH5211_R3582
60.4
RHH5239_R3611
33.2
RHH5268_R3640
52.9
Memory CD4 T-cell Th17 nTPM: 45.4
Samples: 4
Max nTPM: 50.9
Min nTPM: 34.2
RHH5304_R3670
50.9
RHH5212_R3583
48.3
RHH5240_R3612
48.2
RHH5269_R3641
34.2
Memory CD4 T-cell Th2 nTPM: 53.5
Samples: 4
Max nTPM: 59.2
Min nTPM: 48.9
RHH5305_R3671
52.1
RHH5213_R3584
53.7
RHH5241_R3613
59.2
RHH5270_R3642
48.9
Naive CD4 T-cell nTPM: 48.6
Samples: 4
Max nTPM: 51.9
Min nTPM: 43.1
RHH5306_R3672
51.9
RHH5214_R3585
47.7
RHH5242_R3614
51.5
RHH5271_R3643
43.1
Naive CD8 T-cell nTPM: 35.7
Samples: 4
Max nTPM: 42.5
Min nTPM: 25.3
RHH5201_R3572
42.5
RHH5229_R3601
25.3
RHH5258_R3630
41.4
RHH5287_R3659
33.7
Non-Vd2 gdTCR nTPM: 61.5
Samples: 4
Max nTPM: 71.7
Min nTPM: 52.1
RHH5235_R3607
56.3
RHH5264_R3636
71.7
RHH5207_R3578
52.1
RHH5299_R3665
65.8
T-reg nTPM: 53.5
Samples: 4
Max nTPM: 61.6
Min nTPM: 43.4
RHH5301_R3667
52.8
RHH5237_R3609
61.6
RHH5266_R3638
43.4
RHH5209_R3580
56.3
Terminal effector memory CD4 T-cell nTPM: 50.5
Samples: 2
Max nTPM: 65.1
Min nTPM: 35.9
RHH5243_R3615
35.9
RHH5272_R3644
65.1
Terminal effector memory CD8 T-cell nTPM: 52.3
Samples: 4
Max nTPM: 72.7
Min nTPM: 41.2
RHH5232_R3604
48.6
RHH5204_R3575
46.8
RHH5261_R3633
41.2
RHH5296_R3662
72.7
Vd2 gdTCR nTPM: 55.8
Samples: 4
Max nTPM: 67.6
Min nTPM: 42.6
RHH5234_R3606
55.7
RHH5206_R3577
57.1
RHH5263_R3635
42.6
RHH5298_R3664
67.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.