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  • SUMMARY

  • TISSUE

  • BRAIN

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  • NPC2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:134.0 nTPM
HPA Brain:164.6 nTPM
GTEx:134.0 nTPM
Pig:87.3 nTPM
Mouse:53.4 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 77.6
2226 Male, age 75, left hemisphere 88.5
1961 Female, age 42, unknown 66.7
Dorsomedial nucleus
nTPM: 89.9
2041 Female, age 72, unknown 101.3
2017 Female, age 42, unknown 84.8
1989 Male, age 62, unknown 83.7
Lateral hypothalamic area
nTPM: 101.7
2271 Male, age 75, both hemispheres 149.7
1791 Male, age 80, right hemisphere 97.7
2228 Male, age 66, unknown 90.6
2412 Male, age 62, unknown 68.7
Mammillary body
nTPM: 132.6
2413 Male, age 66, unknown 146.4
1945 Male, age 80, right hemisphere 138.4
1834 Female, age 42, unknown 136.0
1923 Female, age 72, unknown 130.4
1948 Female, age 72, unknown 111.8
Paraventricular nucleus
nTPM: 77.5
2700 Male, age 62, unknown 77.5
Preoptic area
nTPM: 79.4
2414 Female, age 72, unknown 104.9
1861 Female, age 42, unknown 80.5
1907 Male, age 80, right hemisphere 52.8
Supraoptic nucleus
nTPM: 164.6
1894 Female, age 72, unknown 206.7
2043 Male, age 62, unknown 188.6
2835 Female, age 72, unknown 98.4
Ventromedial nucleus
nTPM: 71.2
1822 Female, age 42, unknown 77.0
1982 Female, age 72, unknown 65.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 134.0
Samples: 257

Max nTPM: 297.8
Min nTPM: 36.6
Std nTPM: 39.3
Median nTPM: 124.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 297.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 287.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 243.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 242.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 241.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 241.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 240.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 239.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 232.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 226.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 223.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 221.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 218.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 216.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 205.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 200.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 196.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 194.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 189.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 187.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 185.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 184.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 182.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 181.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 180.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 180.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 179.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 179.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 178.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 177.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 177.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 177.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 173.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 173.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 172.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 172.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 171.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 171.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 170.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 170.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 170.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 169.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 167.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 167.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 167.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 166.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 166.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 165.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 165.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 165.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 164.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 163.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 163.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 163.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 162.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 162.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 161.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 161.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 160.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 160.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 160.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 159.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 158.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 157.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 154.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 154.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 154.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 153.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 153.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 153.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 152.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 152.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 152.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 151.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 151.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 151.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 150.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 150.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 150.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 149.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 149.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 148.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 147.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 147.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 145.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 144.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 144.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 143.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 142.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 142.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 140.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 139.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 138.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 137.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 137.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 136.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 135.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 135.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 134.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 134.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 134.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 133.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 133.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 133.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 132.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 132.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 132.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 131.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 131.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 131.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 131.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 130.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 130.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 130.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 129.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 129.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 129.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 129.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 129.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 129.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 128.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 127.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 126.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 126.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 126.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 125.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 125.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 124.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 124.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 124.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 124.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 124.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 123.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 123.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 122.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 122.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 122.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 122.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 121.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 121.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 121.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 120.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 120.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 120.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 120.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 120.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 119.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 119.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 119.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 119.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 119.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 119.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 119.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 118.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 118.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 118.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 117.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 117.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 117.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 117.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 115.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 114.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 114.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 114.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 114.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 113.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 113.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 113.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 113.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 113.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 112.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 112.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 112.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 112.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 112.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 111.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 111.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 111.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 111.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 110.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 110.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 109.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 109.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 109.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 108.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 108.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 108.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 107.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 107.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 107.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 106.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 106.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 106.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 105.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 105.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 105.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 105.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 103.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 103.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 103.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 102.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 102.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 102.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 101.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 101.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 101.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 101.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 100.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 100.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 100.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 100.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 99.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 98.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 98.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 98.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 98.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 97.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 97.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 97.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 97.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 96.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 96.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 96.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 96.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 95.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 94.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 94.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 94.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 93.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 93.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 93.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 93.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 90.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 89.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 87.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 86.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 83.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 82.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 82.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 82.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 82.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 81.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 81.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 78.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 78.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 77.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 76.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 74.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 74.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 71.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 36.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 87.3
Samples: 4

Max nTPM: 151.6
Min nTPM: 48.3
Sample A Female 151.6
Sample B Female 75.6
Sample C Male 73.8
Sample D Male 48.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 53.4
Samples: 4

Max nTPM: 58.5
Min nTPM: 50.0
Sample A Male 50.0
Sample B Male 58.5
Sample C Female 51.5
Sample D Female 53.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.8
75774115 Antisense, RP_060530_01_B11, Mouse strain C57BL/6J (56 days, male) 7.4
293915 Antisense, RP_040617_01_G02, Mouse strain C57BL/6J (56 days, male) 2.3

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