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RPL21
HPA
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  • RPL21
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
Tissue methods
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2172.9 nTPM
HPA:1094.0 nTPM
GTEx:2172.9 nTPM
FANTOM5:33.2 Scaled Tags Per Million
SMALL INTESTINE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047252
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1094.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1331.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1112.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 970.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 961.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2172.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 2172.9
Samples: 207

Max nTPM: 5713.1
Min nTPM: 980.2
Std nTPM: 749.7
Median nTPM: 2064.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 5713.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 5362.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 4305.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4161.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 4063.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 4037.3
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3989.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3716.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3663.0
GTEX-1RQED-2826-SM-HLJQK 60-69 years, male 3635.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 3633.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3606.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 3601.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3497.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3224.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 3183.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 3182.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 3167.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 3164.4
GTEX-1M5QR-2226-SM-HLJRV 40-49 years, male 3076.3
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 3072.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 3055.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3026.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2985.3
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2972.8
GTEX-1HKZK-2226-SM-GA91V 40-49 years, male 2930.4
GTEX-1PFEY-1326-SM-HK791 30-39 years, male 2903.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2875.9
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2837.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2811.2
GTEX-W5X1-1926-SM-GOQYX 40-49 years, female 2776.1
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2769.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2759.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2749.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2743.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2740.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2737.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2730.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2718.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2707.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 2675.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2654.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 2651.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 2647.6
GTEX-1MCYP-1626-SM-HLJQ5 20-29 years, female 2645.7
GTEX-1HSGN-2126-SM-GA8ZB 40-49 years, female 2632.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2627.2
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2612.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2611.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2607.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2593.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 2592.7
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2557.6
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2556.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2553.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2548.1
GTEX-14PKU-1626-SM-6871C 40-49 years, female 2480.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 2475.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2473.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 2467.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2434.7
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2426.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2416.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2392.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2388.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2388.0
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2386.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2382.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2379.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2360.6
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 2346.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2343.1
GTEX-1192X-2526-SM-59868 50-59 years, male 2342.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 2341.4
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2340.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 2330.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 2320.7
GTEX-XPT6-1026-SM-GOQYN 20-29 years, male 2310.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 2306.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2302.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2288.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 2274.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 2272.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 2271.0
GTEX-WHPG-1826-SM-GNTAH 50-59 years, male 2258.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2255.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 2243.9
GTEX-ZPU1-1826-SM-GNTB3 40-49 years, male 2233.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2230.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2218.7
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2180.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 2171.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2164.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 2158.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2157.4
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2113.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2111.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2108.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 2098.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 2096.7
GTEX-178AV-1226-SM-GOR11 40-49 years, male 2095.3
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 2079.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2068.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2064.1
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 2046.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 2040.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 2036.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2023.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 2011.9
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2003.7
GTEX-1HCUA-1726-SM-GA8Z2 50-59 years, female 1980.6
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1979.5
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1971.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1965.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1956.4
GTEX-YJ8A-2126-SM-GQ1C7 20-29 years, male 1951.9
GTEX-U8XE-2226-SM-HAUZQ 30-39 years, male 1946.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1927.6
GTEX-X4LF-1326-SM-HLJSD 50-59 years, male 1915.0
GTEX-1NHNU-2526-SM-HK79M 50-59 years, male 1911.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1906.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1906.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1895.5
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1894.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1884.4
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1874.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1852.0
GTEX-ZV7C-1426-SM-GNTB8 50-59 years, male 1848.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1842.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1833.9
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1831.3
GTEX-13X6H-1826-SM-5O9D1 50-59 years, female 1819.6
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1816.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1808.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1801.8
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1798.1
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1781.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1778.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1769.1
GTEX-YB5K-1126-SM-H6Q6O 40-49 years, female 1764.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1762.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1761.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1756.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1742.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1739.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1732.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1726.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1706.4
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1705.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1699.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1661.9
GTEX-1MA7W-0726-SM-HLJQU 20-29 years, female 1658.6
GTEX-144GM-1026-SM-5O9AZ 20-29 years, male 1656.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1628.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1618.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1607.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1605.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1596.0
GTEX-1S831-1526-SM-HLJQS 20-29 years, male 1592.8
GTEX-X3Y1-1526-SM-H6Q6X 40-49 years, male 1591.8
GTEX-1HBPN-1926-SM-GA91H 50-59 years, male 1589.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1587.4
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1585.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1570.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1564.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1560.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1558.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1546.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1539.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1521.2
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1513.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1508.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1505.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1499.1
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1480.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1477.4
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1471.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1461.8
GTEX-ZT9X-1026-SM-HLJS2 40-49 years, male 1458.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1440.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1439.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1423.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1412.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1379.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1376.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1369.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1367.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1358.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1302.6
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1273.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 1268.8
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1252.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1243.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1236.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1227.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1212.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1204.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1192.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1168.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1164.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1158.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1137.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1133.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1114.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1034.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 987.8
GTEX-111YS-1426-SM-5GID8 60-69 years, male 980.2
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

33.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 33.2
FF:10024-101D6 15,40,85 years, mixed 33.2

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