HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.6 nTPM
HPA Brain:52.6 nTPM
GTEx:29.6 nTPM
FANTOM5:17.1 Scaled Tags Per Million
Pig:20.7 nTPM
Mouse:2.5 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036404Antibody HPA036405
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
2148 Female, age 91, left hemisphere 65.7
2529 Female, age 94, left hemisphere 53.5
1898 Male, age 80, left hemisphere 50.7
2621 Female, age 67, right hemisphere 47.6
1855 Male, age 76, left hemisphere 44.7
1911 Female, age 85, right hemisphere 44.7
Dentate gyrus
nTPM: 52.6
2528 Male, age 74, both hemispheres 65.7
2531 Female, age 67, both hemispheres 57.7
1927 Female, age 91, both hemispheres 55.5
2530 Female, age 94, left hemisphere 47.6
2010 Male, age 76, both hemispheres 45.4
2246 Female, age 85, both hemispheres 43.6
Entorhinal gyrus
nTPM: 45.5
2117 Female, age 91, right hemisphere 57.8
2764 Male, age 80, right hemisphere 50.3
2686 Male, age 75, right hemisphere 47.7
1787 Male, age 76, left hemisphere 40.9
2613 Female, age 94, left hemisphere 38.3
1938 Female, age 85, left hemisphere 37.9
Hippocampus, CA1
nTPM: 50.4
2082 Female, age 91, right hemisphere 57.9
2527 Male, age 74, both hemispheres 54.0
1873 Female, age 85, both hemispheres 51.0
2045 Male, age 76, both hemispheres 49.8
2749 Male, age 80, left hemisphere 39.5
Hippocampus, CA2
nTPM: 48.6
2249 Male, age 74, both hemispheres 59.6
2113 Female, age 91, right hemisphere 52.7
1963 Male, age 80, left hemisphere 50.3
1940 Female, age 85, left hemisphere 45.0
2437 Female, age 94, left hemisphere 44.7
1892 Male, age 76, both hemispheres 39.3
Hippocampus, CA3
nTPM: 49.8
2620 Female, age 94, left hemisphere 66.3
2861 Female, age 67, both hemispheres 59.4
2436 Male, age 74, both hemispheres 56.2
1891 Female, age 85, both hemispheres 40.3
2137 Male, age 80, left hemisphere 38.7
1867 Male, age 76, both hemispheres 37.9
Parahippocampal cortex
nTPM: 43.4
2622 Female, age 67, right hemisphere 54.3
2245 Female, age 91, both hemispheres 48.9
2250 Female, age 67, right hemisphere 45.7
1990 Female, age 91, right hemisphere 44.3
2692 Male, age 74, both hemispheres 44.1
1850 Male, age 80, both hemispheres 40.8
2532 Female, age 72, left hemisphere 40.5
1933 Female, age 85, both hemispheres 40.0
2018 Male, age 76, both hemispheres 37.7
2693 Female, age 94, both hemispheres 37.5
Perirhinal gyrus
nTPM: 43.5
1794 Male, age 80, right hemisphere 51.8
1847 Female, age 91, left hemisphere 45.0
1841 Female, age 85, right hemisphere 42.9
2848 Male, age 76, right hemisphere 40.8
2521 Female, age 94, right hemisphere 36.8
Subiculum
nTPM: 44.0
2729 Female, age 91, right hemisphere 64.3
2619 Male, age 74, both hemispheres 52.7
2438 Female, age 94, left hemisphere 40.9
1977 Female, age 85, both hemispheres 36.8
1901 Male, age 80, both hemispheres 35.2
2042 Male, age 76, both hemispheres 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 255

Max nTPM: 62.2
Min nTPM: 9.1
Std nTPM: 8.8
Median nTPM: 29.1
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 62.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 62.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 56.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 54.7
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 53.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 52.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 50.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 47.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 47.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 46.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 46.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.1
FF:10153-102I9 76 years, female 25.9
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.7
Pig sample Sample description nTPM
Subiculum
nTPM: 19.8
Samples: 4

Max nTPM: 25.8
Min nTPM: 15.8
Sample A Female 25.8
Sample B Female 17.9
Sample C Male 19.6
Sample D Male 15.8
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 18.8
Min nTPM: 14.3
Sample A Female 16.2
Sample B Female 18.8
Sample C Male 15.7
Sample D Male 14.3
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.4
Sample A Female 22.2
Sample B Female 19.1
Sample C Male 22.8
Sample D Male 15.4
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 16.9
Sample A Female 17.9
Sample B Female 16.9
Sample C Male 29.1
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.2
Sample A Male 2.5
Sample B Male 2.3
Sample C Female 3.1
Sample D Female 2.2
Hippocampal formation
nTPM: 2.1
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.6
Sample A Male 1.6
Sample B Male 1.9
Sample C Female 2.0
Sample D Female 2.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71495849 Antisense, RP_050913_03_F11, Mouse strain C57BL/6J (56 days, male) 0.0

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