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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SNRPD2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:296.9 nTPM
HPA Brain:140.4 nTPM
GTEx:296.9 nTPM
Pig:130.4 nTPM
Mouse:50.4 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 133.0
2226 Male, age 75, left hemisphere 141.9
1961 Female, age 42, unknown 124.1
Dorsomedial nucleus
nTPM: 117.9
2041 Female, age 72, unknown 130.0
1989 Male, age 62, unknown 112.8
2017 Female, age 42, unknown 111.0
Lateral hypothalamic area
nTPM: 137.0
1791 Male, age 80, right hemisphere 157.4
2228 Male, age 66, unknown 146.7
2271 Male, age 75, both hemispheres 127.0
2412 Male, age 62, unknown 117.1
Mammillary body
nTPM: 132.3
1923 Female, age 72, unknown 166.2
1948 Female, age 72, unknown 135.0
2413 Male, age 66, unknown 124.2
1945 Male, age 80, right hemisphere 118.0
1834 Female, age 42, unknown 117.9
Paraventricular nucleus
nTPM: 140.4
2700 Male, age 62, unknown 140.4
Preoptic area
nTPM: 121.9
1907 Male, age 80, right hemisphere 137.0
1861 Female, age 42, unknown 122.4
2414 Female, age 72, unknown 106.4
Supraoptic nucleus
nTPM: 138.8
1894 Female, age 72, unknown 146.4
2835 Female, age 72, unknown 135.9
2043 Male, age 62, unknown 134.1
Ventromedial nucleus
nTPM: 126.3
1982 Female, age 72, unknown 139.4
1822 Female, age 42, unknown 113.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

296.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 296.9
Samples: 257

Max nTPM: 656.5
Min nTPM: 125.8
Std nTPM: 67.9
Median nTPM: 287.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 656.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 577.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 575.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 562.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 532.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 514.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 458.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 452.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 447.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 419.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 417.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 416.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 393.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 389.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 388.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 388.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 387.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 385.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 378.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 378.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 376.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 376.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 371.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 370.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 370.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 369.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 362.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 361.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 360.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 360.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 360.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 357.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 356.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 354.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 353.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 353.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 353.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 351.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 351.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 351.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 349.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 348.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 348.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 346.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 346.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 344.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 344.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 343.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 342.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 342.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 341.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 339.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 337.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 336.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 335.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 335.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 335.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 332.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 331.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 330.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 330.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 329.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 329.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 328.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 327.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 326.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 326.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 325.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 324.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 323.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 323.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 322.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 321.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 320.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 320.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 319.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 318.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 318.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 318.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 318.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 318.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 317.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 316.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 315.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 314.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 313.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 313.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 313.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 313.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 312.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 312.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 311.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 309.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 308.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 308.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 307.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 306.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 306.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 306.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 305.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 305.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 305.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 304.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 302.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 300.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 300.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 298.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 298.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 296.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 296.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 295.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 295.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 295.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 294.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 294.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 293.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 293.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 293.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 292.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 292.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 292.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 291.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 291.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 289.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 289.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 289.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 288.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 287.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 287.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 287.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 287.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 287.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 286.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 286.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 285.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 284.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 283.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 283.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 282.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 281.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 280.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 280.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 280.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 280.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 279.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 278.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 277.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 277.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 276.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 276.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 275.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 274.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 274.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 274.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 274.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 273.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 273.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 272.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 272.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 271.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 271.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 270.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 270.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 270.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 269.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 269.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 268.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 268.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 268.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 268.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 268.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 267.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 267.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 266.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 266.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 266.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 266.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 265.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 265.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 265.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 262.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 261.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 260.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 260.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 260.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 257.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 257.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 257.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 256.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 256.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 256.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 255.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 255.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 255.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 254.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 253.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 252.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 252.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 252.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 251.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 251.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 251.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 249.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 248.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 248.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 247.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 246.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 246.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 246.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 245.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 244.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 243.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 243.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 242.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 240.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 240.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 240.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 239.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 237.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 237.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 237.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 235.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 235.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 234.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 234.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 233.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 233.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 232.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 232.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 232.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 231.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 226.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 224.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 223.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 220.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 220.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 220.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 217.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 216.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 216.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 215.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 215.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 213.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 211.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 208.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 205.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 203.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 203.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 198.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 195.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 191.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 191.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 187.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 181.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 172.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 168.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 125.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 130.5
Samples: 4

Max nTPM: 177.9
Min nTPM: 85.6
Sample A Female 177.9
Sample B Female 130.2
Sample C Male 128.1
Sample D Male 85.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 50.4
Samples: 4

Max nTPM: 56.0
Min nTPM: 46.1
Sample A Male 49.9
Sample B Male 56.0
Sample C Female 46.1
Sample D Female 49.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.6
68744002 Antisense, RP_050203_02_A05, Mouse strain C57BL/6J (56 days, male) 3.6

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