We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NAPB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NAPB
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:102.6 nTPM
HPA Brain:225.4 nTPM
GTEx:102.6 nTPM
Pig:89.9 nTPM
Mouse:199.3 nTPM
Allen mouse:17.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 159.8
2226 Male, age 75, left hemisphere 240.1
1961 Female, age 42, unknown 79.4
Dorsomedial nucleus
nTPM: 89.4
1989 Male, age 62, unknown 104.6
2041 Female, age 72, unknown 87.7
2017 Female, age 42, unknown 76.0
Lateral hypothalamic area
nTPM: 225.4
2228 Male, age 66, unknown 357.1
2271 Male, age 75, both hemispheres 270.8
1791 Male, age 80, right hemisphere 165.5
2412 Male, age 62, unknown 108.2
Mammillary body
nTPM: 109.8
1923 Female, age 72, unknown 171.2
2413 Male, age 66, unknown 111.6
1948 Female, age 72, unknown 102.9
1945 Male, age 80, right hemisphere 90.6
1834 Female, age 42, unknown 72.6
Paraventricular nucleus
nTPM: 100.6
2700 Male, age 62, unknown 100.6
Preoptic area
nTPM: 109.5
1907 Male, age 80, right hemisphere 144.8
2414 Female, age 72, unknown 96.1
1861 Female, age 42, unknown 87.5
Supraoptic nucleus
nTPM: 82.9
1894 Female, age 72, unknown 97.6
2835 Female, age 72, unknown 94.9
2043 Male, age 62, unknown 56.0
Ventromedial nucleus
nTPM: 112.2
1982 Female, age 72, unknown 133.3
1822 Female, age 42, unknown 91.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 102.6
Samples: 257

Max nTPM: 349.5
Min nTPM: 19.0
Std nTPM: 49.1
Median nTPM: 96.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 349.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 253.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 228.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 223.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 218.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 213.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 205.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 201.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 200.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 197.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 196.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 195.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 194.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 193.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 192.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 189.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 189.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 187.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 187.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 182.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 182.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 177.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 176.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 176.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 172.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 172.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 172.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 170.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 166.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 165.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 164.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 161.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 160.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 157.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 155.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 154.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 154.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 153.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 153.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 150.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 150.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 149.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 149.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 148.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 147.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 147.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 145.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 145.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 143.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 143.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 142.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 142.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 139.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 138.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 137.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 136.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 135.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 135.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 134.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 133.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 132.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 131.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 131.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 129.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 128.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 128.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 128.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 126.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 126.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 126.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 126.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 126.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 125.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 125.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 125.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 125.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 125.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 123.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 121.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 121.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 121.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 121.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 120.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 120.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 117.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 116.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 115.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 114.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 114.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 113.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 113.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 113.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 113.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 112.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 112.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 112.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 110.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 110.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 110.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 110.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 110.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 109.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 108.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 108.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 108.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 107.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 105.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 105.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 105.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 104.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 104.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 103.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 103.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 102.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 102.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 101.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 100.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 100.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 100.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 100.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 99.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 99.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 99.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 98.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 98.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 96.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 96.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 96.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 96.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 96.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 94.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 94.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 93.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 93.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 93.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 92.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 92.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 91.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 91.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 91.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 90.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 89.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 88.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 88.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 87.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 87.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 87.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 86.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 86.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 85.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 84.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 84.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 84.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 84.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 84.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 84.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 83.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 83.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 83.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 82.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 82.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 79.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 79.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 79.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 79.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 79.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 78.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 77.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 76.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 76.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 76.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 75.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 74.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 74.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 74.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 74.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 73.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 72.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 72.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 72.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 69.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 68.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 68.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 68.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 67.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 67.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 67.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 66.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 65.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 65.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 65.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 65.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 64.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 64.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 64.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 63.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 63.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 62.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 62.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 62.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 61.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 61.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 61.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 61.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 61.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 60.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 60.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 59.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 59.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 58.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 58.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 58.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 58.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 57.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 55.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 55.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 54.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 53.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 51.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 50.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 50.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 49.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 49.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 46.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 45.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 45.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 43.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 43.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 43.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 42.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 41.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 41.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 40.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 39.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 38.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 37.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 37.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 34.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 33.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 33.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 33.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 32.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 31.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 31.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 31.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 31.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 29.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 26.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 23.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 19.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 90.0
Samples: 4

Max nTPM: 129.4
Min nTPM: 62.0
Sample A Female 129.4
Sample B Female 91.5
Sample C Male 76.9
Sample D Male 62.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 199.3
Samples: 4

Max nTPM: 214.1
Min nTPM: 189.2
Sample A Male 195.1
Sample B Male 198.6
Sample C Female 214.1
Sample D Female 189.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.6
68924401 Antisense, RP_050303_02_C08, Mouse strain C57BL/6J (56 days, male) 18.0
75651234 Antisense, RP_060518_01_D12, Mouse strain C57BL/6J (56 days, male) 17.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo