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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:131.1 nTPM
HPA Brain:106.4 nTPM
GTEx:131.1 nTPM
Pig:117.0 nTPM
Mouse:73.7 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 92.8
2226 Male, age 75, left hemisphere 103.8
1961 Female, age 42, unknown 81.8
Dorsomedial nucleus
nTPM: 80.3
2041 Female, age 72, unknown 87.9
2017 Female, age 42, unknown 79.2
1989 Male, age 62, unknown 73.7
Lateral hypothalamic area
nTPM: 96.9
2228 Male, age 66, unknown 111.4
2271 Male, age 75, both hemispheres 105.9
1791 Male, age 80, right hemisphere 100.6
2412 Male, age 62, unknown 69.8
Mammillary body
nTPM: 96.9
1923 Female, age 72, unknown 111.7
1945 Male, age 80, right hemisphere 103.2
1948 Female, age 72, unknown 100.5
2413 Male, age 66, unknown 85.4
1834 Female, age 42, unknown 83.5
Paraventricular nucleus
nTPM: 89.1
2700 Male, age 62, unknown 89.1
Preoptic area
nTPM: 84.5
1907 Male, age 80, right hemisphere 89.3
2414 Female, age 72, unknown 88.0
1861 Female, age 42, unknown 76.2
Supraoptic nucleus
nTPM: 106.4
1894 Female, age 72, unknown 121.5
2043 Male, age 62, unknown 112.0
2835 Female, age 72, unknown 85.7
Ventromedial nucleus
nTPM: 78.3
1982 Female, age 72, unknown 82.6
1822 Female, age 42, unknown 74.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 131.1
Samples: 257

Max nTPM: 230.1
Min nTPM: 87.9
Std nTPM: 23.4
Median nTPM: 127.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 230.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 201.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 196.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 194.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 193.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 192.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 192.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 191.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 185.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 181.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 180.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 179.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 177.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 177.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 172.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 172.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 171.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 170.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 169.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 169.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 167.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 166.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 166.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 165.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 164.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 163.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 162.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 161.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 161.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 160.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 160.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 160.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 160.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 160.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 159.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 159.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 159.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 157.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 157.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 155.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 155.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 155.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 153.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 153.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 152.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 152.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 150.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 149.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 148.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 148.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 148.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 147.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 146.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 146.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 146.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 145.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 145.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 145.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 145.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 144.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 144.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 144.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 144.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 143.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 143.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 143.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 143.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 142.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 141.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 141.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 141.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 140.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 140.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 139.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 139.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 138.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 138.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 137.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 137.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 137.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 136.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 136.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 136.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 136.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 135.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 135.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 135.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 135.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 135.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 135.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 134.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 134.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 134.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 133.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 132.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 132.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 132.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 131.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 131.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 131.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 131.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 131.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 131.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 131.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 130.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 130.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 130.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 130.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 130.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 130.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 130.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 130.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 130.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 129.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 129.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 129.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 129.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 129.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 129.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 129.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 128.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 128.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 128.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 128.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 128.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 127.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 127.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 127.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 127.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 127.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 127.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 127.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 126.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 126.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 126.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 126.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 126.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 126.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 125.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 125.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 125.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 124.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 124.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 124.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 124.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 124.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 124.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 124.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 123.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 123.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 123.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 123.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 122.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 122.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 122.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 121.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 121.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 120.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 120.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 120.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 120.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 120.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 120.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 120.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 120.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 120.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 120.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 120.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 120.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 119.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 119.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 119.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 119.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 118.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 118.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 118.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 117.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 116.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 116.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 116.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 116.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 116.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 115.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 115.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 115.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 115.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 115.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 115.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 115.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 114.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 114.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 114.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 114.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 114.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 114.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 114.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 114.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 113.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 113.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 113.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 113.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 113.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 112.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 112.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 112.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 112.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 111.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 111.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 111.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 111.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 111.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 111.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 111.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 110.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 110.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 110.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 109.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 108.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 108.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 108.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 107.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 107.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 106.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 105.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 105.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 105.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 105.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 105.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 104.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 104.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 103.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 103.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 102.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 102.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 101.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 101.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 101.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 100.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 100.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 99.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 99.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 99.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 98.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 98.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 98.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 97.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 97.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 97.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 96.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 95.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 95.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 94.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 90.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 87.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 117.0
Samples: 4

Max nTPM: 146.1
Min nTPM: 97.8
Sample A Female 146.1
Sample B Female 125.2
Sample C Male 99.0
Sample D Male 97.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 73.7
Samples: 4

Max nTPM: 78.0
Min nTPM: 69.4
Sample A Male 76.4
Sample B Male 78.0
Sample C Female 71.0
Sample D Female 69.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.8
68269276 Antisense, RP_041208_02_A10, Mouse strain C57BL/6J (56 days, male) 4.8

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