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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.3
Sample id
Sample description
nTPM
Amygdala nTPM: 11.1
1987
Female, age 91, left hemisphere
12.3
2517
Female, age 94, left hemisphere
11.3
2814
Male, age 76, right hemisphere
11.3
2695
Female, age 67, right hemisphere
11.1
2514
Male, age 75, right hemisphere
9.5
Basal amygdala nTPM: 11.3
2685
Female, age 94, left hemisphere
12.6
2243
Female, age 91, right hemisphere
12.4
2609
Male, age 75, right hemisphere
12.4
2827
Female, age 67, right hemisphere
11.1
1955
Male, age 76, both hemispheres
9.8
2110
Male, age 80, left hemisphere
9.2
Central amygdala nTPM: 11.1
2826
Female, age 94, left hemisphere
13.2
2239
Male, age 80, left hemisphere
11.2
1905
Male, age 76, both hemispheres
10.7
2515
Male, age 75, right hemisphere
10.7
2701
Female, age 91, right hemisphere
9.8
Corticomedial amygdala nTPM: 10.6
2829
Male, age 80, left hemisphere
11.8
2242
Female, age 91, right hemisphere
11.7
2428
Male, age 75, right hemisphere
10.3
2535
Female, age 67, right hemisphere
10.3
2240
Male, age 76, both hemispheres
9.8
2429
Female, age 94, left hemisphere
9.8
Lateral amygdala nTPM: 10.6
2516
Male, age 75, right hemisphere
13.9
1883
Male, age 76, both hemispheres
11.8
2830
Female, age 67, right hemisphere
10.8
2534
Female, age 94, left hemisphere
10.1
2255
Female, age 91, right hemisphere
9.1
2256
Male, age 80, left hemisphere
8.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 35.8
Samples: 181
Max nTPM: 109.3
Min nTPM: 18.9
Std nTPM: 10.9
Median nTPM: 33.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
109.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
67.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
66.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
66.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
60.2
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
59.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
58.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
56.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
56.3
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
56.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
55.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
53.2
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
52.5
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
52.1
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
51.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
49.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
49.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
48.5
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
47.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
45.8
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
45.5
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
45.5
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
45.1
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
44.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
44.9
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
44.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
44.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
44.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
43.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
43.2
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
43.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
42.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
42.8
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
42.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
42.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
42.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
41.8
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
41.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
41.3
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
41.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
40.9
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
40.9
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
40.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
40.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
40.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
40.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
40.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
40.2
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
39.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
38.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
38.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
38.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
38.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
38.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
38.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
38.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
38.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
38.2
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
38.0
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
37.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
37.9
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
37.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
37.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
37.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
36.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
36.6
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
36.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
36.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
36.2
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
35.8
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
35.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
35.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
35.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
35.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
34.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
34.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
34.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.5
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
34.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
34.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
34.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
34.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
33.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
33.8
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
33.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
33.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.3
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
33.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
33.0
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
33.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
32.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
32.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
32.6
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
32.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
32.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
32.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
32.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
32.2
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
32.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
32.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
31.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
31.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
31.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
31.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
31.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
31.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
31.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
31.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
31.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
30.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
30.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
30.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
30.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
30.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
29.9
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
29.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
29.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
29.5
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
29.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
29.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
29.2
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
29.2
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
29.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
29.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
29.0
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
28.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
28.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
28.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
28.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
27.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
27.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
27.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
27.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
27.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
27.0
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
27.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
26.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
26.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.4
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
26.4
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
25.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
25.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
25.4
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
25.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
24.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
24.6
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
24.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
24.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
24.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
24.2
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
24.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
24.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
23.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
22.9
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
22.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
22.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
22.0
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
21.9
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
21.2
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
21.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.9
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
20.7
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
19.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
19.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
18.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
66.7
Pig sample
Sample description
nTPM
Amygdala nTPM: 66.7
Samples: 4
Max nTPM: 86.1
Min nTPM: 56.0
Sample A
Female
86.1
Sample B
Female
65.3
Sample C
Male
59.4
Sample D
Male
56.0
AMYGDALA - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
116.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 116.9
Samples: 4
Max nTPM: 119.5
Min nTPM: 113.8
Sample A
Male
119.0
Sample B
Male
119.5
Sample C
Female
115.4
Sample D
Female
113.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
