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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
164.0
nTPM
FANTOM5:
75.9
Scaled Tags Per Million
Pig:
93.9
nTPM
Allen mouse:
2.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
164.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 85.9
1984
Male, age 76, both hemispheres
129.5
2301
Female, age 85, both hemispheres
93.2
2188
Female, age 91, both hemispheres
66.7
2090
Male, age 80, both hemispheres
54.0
Dorsal cochlear nucleus nTPM: 82.9
2370
Male, age 61, both hemispheres
95.0
2187
Female, age 91, both hemispheres
93.6
2058
Male, age 76, both hemispheres
86.8
2802
Male, age 74, right hemisphere
73.5
2378
Male, age 80, both hemispheres
65.3
Dorsal tegmental nucleus nTPM: 86.8
1936
Male, age 76, left hemisphere
99.6
2083
Male, age 80, both hemispheres
90.9
2358
Male, age 61, both hemispheres
89.4
2326
Male, age 74, both hemispheres
67.3
Dorsolateral tegmental area nTPM: 70.5
2141
Male, age 76, both hemispheres
89.8
2654
Male, age 80, both hemispheres
87.4
2751
Female, age 85, both hemispheres
71.7
2337
Male, age 61, both hemispheres
52.2
2360
Male, age 74, both hemispheres
51.7
Kolliker-Fuse nucleus nTPM: 92.0
2793
Female, age 91, left hemisphere
112.0
2163
Male, age 80, both hemispheres
108.3
2315
Male, age 76, right hemisphere
55.7
Lateral lemniscal nuclei nTPM: 150.9
2453
Male, age 74, right hemisphere
177.8
2169
Male, age 76, both hemispheres
165.7
2320
Female, age 91, left hemisphere
155.2
2036
Male, age 80, both hemispheres
152.5
2746
Female, age 85, left hemisphere
103.1
Lateral parabrachial nucleus nTPM: 82.4
2139
Female, age 85, right hemisphere
123.5
2790
Male, age 61, both hemispheres
99.7
2013
Male, age 80, both hemispheres
77.2
2792
Male, age 76, both hemispheres
29.0
Lateral vestibular nucleus nTPM: 109.8
2184
Male, age 76, both hemispheres
137.6
2311
Male, age 80, both hemispheres
82.0
Locus coeruleus nTPM: 143.2
2162
Male, age 80, both hemispheres
164.9
2720
Male, age 74, both hemispheres
162.8
2317
Female, age 72, unknown
152.2
2123
Female, age 91, both hemispheres
143.6
1980
Male, age 76, both hemispheres
140.7
2014
Male, age 55, unknown
133.9
2788
Male, age 74, unknown
104.1
Medial parabrachial nucleus nTPM: 99.2
2156
Male, age 61, both hemispheres
129.9
2463
Female, age 85, right hemisphere
103.1
2786
Male, age 76, both hemispheres
100.2
2854
Male, age 80, both hemispheres
81.6
2170
Female, age 91, both hemispheres
81.2
Medial periolivary nuclei nTPM: 130.8
2171
Female, age 85, both hemispheres
178.7
2063
Male, age 76, both hemispheres
166.6
2458
Female, age 91, both hemispheres
130.3
2791
Male, age 74, right hemisphere
100.0
2081
Male, age 80, both hemispheres
78.4
Motor facial nucleus nTPM: 148.5
2795
Female, age 91, both hemispheres
197.4
2062
Male, age 76, both hemispheres
195.8
2327
Male, age 80, both hemispheres
181.3
2365
Male, age 74, right hemisphere
114.7
2697
Female, age 85, both hemispheres
111.3
2126
Male, age 61, both hemispheres
90.7
Motor trigeminal nucleus nTPM: 121.9
2560
Male, age 74, both hemispheres
151.3
2321
Female, age 91, both hemispheres
124.6
2335
Male, age 61, both hemispheres
120.6
2079
Male, age 80, both hemispheres
117.0
2309
Male, age 76, both hemispheres
96.1
Nuclei of the trapezoid body nTPM: 164.0
2735
Female, age 85, both hemispheres
180.9
2368
Female, age 91, both hemispheres
180.0
1983
Male, age 76, both hemispheres
163.9
2159
Male, age 61, both hemispheres
160.3
2166
Male, age 80, both hemispheres
134.8
Nucleus raphe magnus nTPM: 158.9
2172
Female, age 85, both hemispheres
202.5
2328
Male, age 80, both hemispheres
166.2
2455
Male, age 74, both hemispheres
159.0
2160
Male, age 61, both hemispheres
147.5
2459
Female, age 91, both hemispheres
143.0
2051
Male, age 76, both hemispheres
135.0
Paramedian reticular nucleus nTPM: 93.6
2313
Male, age 61, both hemispheres
124.0
2050
Female, age 85, both hemispheres
117.5
2057
Male, age 80, both hemispheres
86.7
2052
Male, age 76, both hemispheres
46.1
Pedunculopontine tegmental nucleus nTPM: 89.5
1921
Female, age 85, both hemispheres
107.9
2334
Male, age 80, both hemispheres
94.7
2338
Male, age 61, both hemispheres
66.0
Pontine nuclei nTPM: 122.6
2787
Female, age 85, both hemispheres
184.0
1968
Male, age 76, left hemisphere
176.8
1863
Male, age 55, unknown
131.9
2115
Male, age 80, left hemisphere
109.4
2109
Female, age 72, unknown
106.2
2727
Male, age 61, right hemisphere
101.9
2454
Male, age 74, left hemisphere
94.6
2319
Female, age 91, both hemispheres
75.9
Pontine raphe nucleus nTPM: 126.2
2853
Male, age 76, midline
134.9
2122
Female, age 85, midline
117.4
Posteroventral cochlear nucleus nTPM: 68.0
2752
Female, age 85, both hemispheres
123.2
2070
Male, age 76, both hemispheres
91.8
2371
Male, age 61, both hemispheres
82.1
2341
Male, age 80, both hemispheres
30.9
2135
Female, age 91, both hemispheres
12.0
Principal sensory trigeminal nucleus nTPM: 123.7
2158
Male, age 61, both hemispheres
148.4
2008
Male, age 80, left hemisphere
126.3
2324
Male, age 76, both hemispheres
121.5
2367
Female, age 91, left hemisphere
98.5
Reticular pontine nucleus, caudal nTPM: 136.9
2332
Male, age 80, right hemisphere
213.9
2457
Female, age 91, both hemispheres
139.7
2092
Male, age 76, both hemispheres
115.6
2559
Male, age 74, both hemispheres
78.3
Reticular pontine nucleus, oral nTPM: 96.2
2167
Male, age 76, both hemispheres
111.7
2366
Female, age 91, both hemispheres
103.3
2012
Female, age 85, both hemispheres
95.1
2361
Male, age 74, both hemispheres
95.0
1939
Male, age 80, both hemispheres
75.9
Reticulotegmental nucleus nTPM: 133.4
2325
Male, age 76, both hemispheres
147.3
2452
Male, age 74, both hemispheres
132.9
2333
Male, age 80, both hemispheres
131.2
2322
Female, age 91, both hemispheres
122.3
Spinal trigeminal nucleus, oral nTPM: 150.8
1978
Male, age 76, both hemispheres
228.7
2737
Female, age 85, both hemispheres
113.5
2164
Male, age 80, both hemispheres
110.2
Subcoeruleus area nTPM: 111.2
2089
Male, age 76, left hemisphere
133.6
2451
Male, age 74, both hemispheres
129.7
2323
Female, age 91, left hemisphere
129.2
1958
Male, age 80, both hemispheres
102.5
2369
Female, age 85, left hemisphere
60.8
Superior olive nTPM: 124.3
2561
Female, age 91, both hemispheres
162.2
2329
Male, age 80, right hemisphere
155.0
1875
Female, age 85, both hemispheres
110.3
2020
Male, age 76, both hemispheres
104.4
2364
Male, age 74, right hemisphere
89.8
Ventral periolivary nuclei nTPM: 137.5
2165
Male, age 80, both hemispheres
164.1
2794
Female, age 91, left hemisphere
151.1
2130
Female, age 85, both hemispheres
141.9
2023
Male, age 76, both hemispheres
92.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 121.0
2449
Male, age 74, both hemispheres
153.3
2456
Female, age 91, both hemispheres
140.8
2161
Male, age 80, both hemispheres
138.6
1959
Male, age 76, both hemispheres
119.4
2359
Male, age 61, both hemispheres
94.2
2840
Female, age 85, both hemispheres
79.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
93.9
Pig sample
Sample description
nTPM
Pons nTPM: 94.0
Samples: 4
Max nTPM: 239.2
Min nTPM: 42.1
Sample A
Female
239.2
Sample B
Female
48.3
Sample C
Male
46.2
Sample D
Male
42.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.