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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.1
nTPM
Monaco:
20.6
nTPM
Schmiedel:
6.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.1
HPA sample
nTPM
gdT-cell nTPM: 30.9
Samples: 6
Max nTPM: 36.2
Min nTPM: 23.9
P10809_1007
23.9
P10809_1022
31.2
P10809_1041
36.2
P10809_1060
24.9
P10809_1077
33.0
P10809_1098
36.2
MAIT T-cell nTPM: 42.4
Samples: 6
Max nTPM: 58.2
Min nTPM: 28.7
P10809_1006
28.7
P10809_1024
43.6
P10809_1043
50.4
P10809_1062
37.9
P10809_1083
35.6
P10809_1097
58.2
Memory CD4 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 25.2
Min nTPM: 10.6
P10809_1014
17.4
P10809_1026
25.2
P10809_1045
22.9
P10809_1064
21.1
P10809_1086
10.6
P10809_1113
22.8
Memory CD8 T-cell nTPM: 26.3
Samples: 5
Max nTPM: 37.4
Min nTPM: 15.3
P10809_1012
15.3
P10809_1027
17.5
P10809_1046
37.4
P10809_1065
32.2
P10809_1111
29.0
Naive CD4 T-cell nTPM: 2.7
Samples: 6
Max nTPM: 5.7
Min nTPM: 1.4
P10809_1015
2.2
P10809_1030
1.4
P10809_1049
2.2
P10809_1068
2.4
P10809_1085
5.7
P10809_1112
2.3
Naive CD8 T-cell nTPM: 10.3
Samples: 6
Max nTPM: 16.3
Min nTPM: 3.0
P10809_1016
4.2
P10809_1031
3.0
P10809_1050
13.0
P10809_1069
15.6
P10809_1087
16.3
P10809_1110
9.4
T-reg nTPM: 44.1
Samples: 6
Max nTPM: 65.5
Min nTPM: 22.5
P10809_1018
42.1
P10809_1037
34.5
P10809_1056
65.5
P10809_1075
38.7
P10809_1094
22.5
P10809_1106
61.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 13.4
Min nTPM: 3.0
RHH5202_R3573
11.6
RHH5230_R3602
8.8
RHH5259_R3631
3.0
RHH5288_R3660
13.4
Effector memory CD8 T-cell nTPM: 19.3
Samples: 4
Max nTPM: 22.8
Min nTPM: 10.5
RHH5203_R3574
21.2
RHH5231_R3603
22.8
RHH5260_R3632
10.5
RHH5289_R3661
22.7
MAIT T-cell nTPM: 17.3
Samples: 4
Max nTPM: 22.0
Min nTPM: 11.1
RHH5233_R3605
22.0
RHH5205_R3576
11.1
RHH5262_R3634
17.0
RHH5297_R3663
19.2
Memory CD4 T-cell TFH nTPM: 11.7
Samples: 4
Max nTPM: 14.6
Min nTPM: 10.2
RHH5300_R3666
10.3
RHH5236_R3608
10.2
RHH5265_R3637
11.5
RHH5208_R3579
14.6
Memory CD4 T-cell Th1 nTPM: 10.6
Samples: 4
Max nTPM: 15.3
Min nTPM: 7.5
RHH5210_R3581
10.4
RHH5302_R3668
15.3
RHH5238_R3610
9.3
RHH5267_R3639
7.5
Memory CD4 T-cell Th1/Th17 nTPM: 11.4
Samples: 4
Max nTPM: 14.0
Min nTPM: 7.0
RHH5303_R3669
12.7
RHH5211_R3582
14.0
RHH5239_R3611
7.0
RHH5268_R3640
11.7
Memory CD4 T-cell Th17 nTPM: 11.2
Samples: 4
Max nTPM: 19.1
Min nTPM: 7.7
RHH5304_R3670
7.7
RHH5212_R3583
19.1
RHH5240_R3612
9.0
RHH5269_R3641
8.9
Memory CD4 T-cell Th2 nTPM: 9.4
Samples: 4
Max nTPM: 11.2
Min nTPM: 6.6
RHH5305_R3671
10.2
RHH5213_R3584
9.5
RHH5241_R3613
6.6
RHH5270_R3642
11.2
Naive CD4 T-cell nTPM: 4.4
Samples: 4
Max nTPM: 6.9
Min nTPM: 2.0
RHH5306_R3672
2.0
RHH5214_R3585
4.8
RHH5242_R3614
6.9
RHH5271_R3643
3.7
Naive CD8 T-cell nTPM: 3.0
Samples: 4
Max nTPM: 5.2
Min nTPM: 0.8
RHH5201_R3572
0.8
RHH5229_R3601
5.2
RHH5258_R3630
1.8
RHH5287_R3659
4.2
Non-Vd2 gdTCR nTPM: 20.6
Samples: 4
Max nTPM: 25.9
Min nTPM: 11.6
RHH5235_R3607
11.6
RHH5264_R3636
25.9
RHH5207_R3578
19.3
RHH5299_R3665
25.5
T-reg nTPM: 13.3
Samples: 4
Max nTPM: 22.4
Min nTPM: 7.7
RHH5301_R3667
22.4
RHH5237_R3609
13.7
RHH5266_R3638
7.7
RHH5209_R3580
9.2
Terminal effector memory CD4 T-cell nTPM: 16.0
Samples: 2
Max nTPM: 18.3
Min nTPM: 13.6
RHH5243_R3615
13.6
RHH5272_R3644
18.3
Terminal effector memory CD8 T-cell nTPM: 20.0
Samples: 4
Max nTPM: 25.7
Min nTPM: 11.6
RHH5232_R3604
19.5
RHH5204_R3575
23.2
RHH5261_R3633
11.6
RHH5296_R3662
25.7
Vd2 gdTCR nTPM: 20.6
Samples: 4
Max nTPM: 33.6
Min nTPM: 7.1
RHH5234_R3606
23.6
RHH5206_R3577
33.6
RHH5263_R3635
7.1
RHH5298_R3664
17.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.