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  • TISSUE

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  • ANAPC13
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:83.5 nTPM
HPA Brain:51.7 nTPM
GTEx:83.5 nTPM
Pig:95.8 nTPM
Mouse:69.3 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 50.3
2226 Male, age 75, left hemisphere 63.2
1961 Female, age 42, unknown 37.4
Dorsomedial nucleus
nTPM: 38.6
2041 Female, age 72, unknown 50.6
2017 Female, age 42, unknown 34.7
1989 Male, age 62, unknown 30.5
Lateral hypothalamic area
nTPM: 51.7
2228 Male, age 66, unknown 62.0
1791 Male, age 80, right hemisphere 57.4
2271 Male, age 75, both hemispheres 47.1
2412 Male, age 62, unknown 40.5
Mammillary body
nTPM: 47.7
1923 Female, age 72, unknown 66.4
1948 Female, age 72, unknown 45.7
2413 Male, age 66, unknown 45.4
1945 Male, age 80, right hemisphere 43.5
1834 Female, age 42, unknown 37.6
Paraventricular nucleus
nTPM: 39.0
2700 Male, age 62, unknown 39.0
Preoptic area
nTPM: 43.0
1907 Male, age 80, right hemisphere 51.4
1861 Female, age 42, unknown 43.2
2414 Female, age 72, unknown 34.5
Supraoptic nucleus
nTPM: 49.5
1894 Female, age 72, unknown 53.8
2043 Male, age 62, unknown 50.3
2835 Female, age 72, unknown 44.4
Ventromedial nucleus
nTPM: 36.8
1982 Female, age 72, unknown 38.0
1822 Female, age 42, unknown 35.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 83.5
Samples: 257

Max nTPM: 167.3
Min nTPM: 38.6
Std nTPM: 19.7
Median nTPM: 82.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 167.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 143.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 136.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 134.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 134.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 133.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 127.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 127.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 125.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 118.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 116.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 115.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 115.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 115.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 113.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 113.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 111.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 110.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 110.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 110.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 108.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 108.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 108.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 108.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 107.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 107.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 107.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 106.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 105.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 105.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 105.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 105.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 103.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 103.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 103.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 102.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 102.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 101.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 100.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 100.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 100.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 99.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 99.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 99.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 99.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 99.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 98.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 98.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 98.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 98.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 98.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 98.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 97.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 97.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 97.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 97.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 96.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 96.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 96.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 96.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 95.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 95.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 94.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 94.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 94.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 94.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 93.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 92.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 92.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 92.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 91.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 91.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 91.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 91.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 90.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 90.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 89.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 89.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 89.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 89.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 89.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 89.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 89.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 88.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 88.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 88.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 88.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 88.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 88.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 88.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 88.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 88.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 87.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 87.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 87.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 87.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 87.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 87.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 86.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 86.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 86.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 86.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 86.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 86.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 86.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 86.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 85.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 85.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 85.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 85.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 85.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 84.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 84.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 84.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 84.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 84.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 84.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 83.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 83.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 83.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 83.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 83.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 82.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 82.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 82.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 82.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 82.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 82.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 81.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 81.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 81.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 81.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 80.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 80.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 80.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 79.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 79.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 79.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 79.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 78.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 78.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 78.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 78.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 78.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 77.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 77.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 77.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 77.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 77.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 76.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 76.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 76.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 75.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 75.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 75.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 75.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 75.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 75.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 75.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 75.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 75.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 74.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 74.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 74.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 74.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 73.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 73.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 73.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 73.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 73.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 73.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 73.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 73.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 72.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 72.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 72.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 72.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 72.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 72.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 72.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 71.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 71.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 71.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 71.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 71.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 71.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 70.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 70.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 70.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 70.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 70.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 69.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 69.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 69.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 68.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 68.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 68.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 67.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 67.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 67.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 67.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 66.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 66.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 66.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 65.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 65.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 65.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 65.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 65.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 64.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 63.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 62.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 61.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 61.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 60.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 60.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 60.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 60.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 60.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 59.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 59.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 58.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 58.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 57.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 56.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 56.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 56.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 56.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 55.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 54.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 54.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 54.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 52.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 52.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 52.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 51.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 49.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 48.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 48.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 47.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 46.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 44.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 44.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 41.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 40.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 38.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 95.8
Samples: 4

Max nTPM: 119.3
Min nTPM: 70.0
Sample A Female 119.3
Sample B Female 102.8
Sample C Male 91.1
Sample D Male 70.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 69.3
Samples: 4

Max nTPM: 73.0
Min nTPM: 64.1
Sample A Male 64.1
Sample B Male 73.0
Sample C Female 71.9
Sample D Female 68.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
68744773 Antisense, RP_050208_01_F04, Mouse strain C57BL/6J (56 days, male) 0.4

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