HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:419.2 nTPM
HPA Brain:282.1 nTPM
GTEx:419.2 nTPM
FANTOM5:221.5 Scaled Tags Per Million
Pig:441.4 nTPM
Mouse:2.6 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001140
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 282.1
Sample id Sample description nTPM
Hippocampus
nTPM: 199.0
2529 Female, age 94, left hemisphere 229.4
1911 Female, age 85, right hemisphere 224.7
2621 Female, age 67, right hemisphere 219.9
1898 Male, age 80, left hemisphere 197.8
1855 Male, age 76, left hemisphere 188.6
2148 Female, age 91, left hemisphere 133.8
Dentate gyrus
nTPM: 196.1
2530 Female, age 94, left hemisphere 323.1
2528 Male, age 74, both hemispheres 221.9
2010 Male, age 76, both hemispheres 201.8
2246 Female, age 85, both hemispheres 164.2
2531 Female, age 67, both hemispheres 150.8
1927 Female, age 91, both hemispheres 115.0
Entorhinal gyrus
nTPM: 200.1
2117 Female, age 91, right hemisphere 361.9
2764 Male, age 80, right hemisphere 245.8
1938 Female, age 85, left hemisphere 170.9
2686 Male, age 75, right hemisphere 153.4
2613 Female, age 94, left hemisphere 138.8
1787 Male, age 76, left hemisphere 129.7
Hippocampus, CA1
nTPM: 142.1
2527 Male, age 74, both hemispheres 211.6
1873 Female, age 85, both hemispheres 168.2
2082 Female, age 91, right hemisphere 141.5
2749 Male, age 80, left hemisphere 133.9
2045 Male, age 76, both hemispheres 55.1
Hippocampus, CA2
nTPM: 208.5
1963 Male, age 80, left hemisphere 279.6
2249 Male, age 74, both hemispheres 273.5
2437 Female, age 94, left hemisphere 255.1
1940 Female, age 85, left hemisphere 176.0
2113 Female, age 91, right hemisphere 162.6
1892 Male, age 76, both hemispheres 104.0
Hippocampus, CA3
nTPM: 144.4
1891 Female, age 85, both hemispheres 264.3
2436 Male, age 74, both hemispheres 167.0
1867 Male, age 76, both hemispheres 160.1
2137 Male, age 80, left hemisphere 98.2
2861 Female, age 67, both hemispheres 94.4
2620 Female, age 94, left hemisphere 82.1
Parahippocampal cortex
nTPM: 158.7
2532 Female, age 72, left hemisphere 247.3
2692 Male, age 74, both hemispheres 229.2
1990 Female, age 91, right hemisphere 186.2
1850 Male, age 80, both hemispheres 183.1
2245 Female, age 91, both hemispheres 157.6
2018 Male, age 76, both hemispheres 156.9
1933 Female, age 85, both hemispheres 145.6
2693 Female, age 94, both hemispheres 110.2
2250 Female, age 67, right hemisphere 105.3
2622 Female, age 67, right hemisphere 65.4
Perirhinal gyrus
nTPM: 107.8
2521 Female, age 94, right hemisphere 135.3
1794 Male, age 80, right hemisphere 113.2
2848 Male, age 76, right hemisphere 109.1
1847 Female, age 91, left hemisphere 95.7
1841 Female, age 85, right hemisphere 85.7
Subiculum
nTPM: 282.1
2042 Male, age 76, both hemispheres 364.9
2438 Female, age 94, left hemisphere 349.8
1901 Male, age 80, both hemispheres 308.9
1977 Female, age 85, both hemispheres 250.9
2619 Male, age 74, both hemispheres 243.3
2729 Female, age 91, right hemisphere 174.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 419.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 419.2
Samples: 255

Max nTPM: 1548.6
Min nTPM: 62.5
Std nTPM: 234.7
Median nTPM: 381.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1548.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1262.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1113.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1087.6
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 1012.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1001.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 997.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 993.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 975.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 956.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 922.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 221.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 221.5
FF:10153-102I9 76 years, female 245.6
FF:10169-103B7 60 years, female 197.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 441.4
Pig sample Sample description nTPM
Subiculum
nTPM: 441.4
Samples: 4

Max nTPM: 474.2
Min nTPM: 388.9
Sample A Female 474.2
Sample B Female 466.8
Sample C Male 435.7
Sample D Male 388.9
Dorsal hippocampus
nTPM: 306.4
Samples: 4

Max nTPM: 359.4
Min nTPM: 256.0
Sample A Female 343.9
Sample B Female 266.1
Sample C Male 359.4
Sample D Male 256.0
Entorhinal cortex
nTPM: 313.9
Samples: 4

Max nTPM: 430.9
Min nTPM: 233.5
Sample A Female 257.9
Sample B Female 333.2
Sample C Male 430.9
Sample D Male 233.5
Ventral hippocampus
nTPM: 379.8
Samples: 4

Max nTPM: 550.7
Min nTPM: 248.3
Sample A Female 341.1
Sample B Female 378.9
Sample C Male 550.7
Sample D Male 248.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 4.1
Min nTPM: 1.1
Sample A Male 2.3
Sample B Male 1.1
Sample C Female 4.1
Sample D Female 2.3
Hippocampal formation
nTPM: 2.6
Samples: 4

Max nTPM: 3.4
Min nTPM: 1.8
Sample A Male 3.4
Sample B Male 1.8
Sample C Female 2.4
Sample D Female 2.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68522503 Antisense, RP_050118_02_B09, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo