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  • TISSUE

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  • RNASE1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:232.3 nTPM
HPA Brain:345.6 nTPM
GTEx:232.3 nTPM
Pig:277.7 nTPM
Mouse:5.5 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

345.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 64.6
2226 Male, age 75, left hemisphere 102.6
1961 Female, age 42, unknown 26.6
Dorsomedial nucleus
nTPM: 113.6
2017 Female, age 42, unknown 186.1
1989 Male, age 62, unknown 106.5
2041 Female, age 72, unknown 48.2
Lateral hypothalamic area
nTPM: 198.2
2228 Male, age 66, unknown 282.7
2271 Male, age 75, both hemispheres 217.0
1791 Male, age 80, right hemisphere 152.5
2412 Male, age 62, unknown 140.7
Mammillary body
nTPM: 345.6
1945 Male, age 80, right hemisphere 406.7
1834 Female, age 42, unknown 369.3
1948 Female, age 72, unknown 355.9
2413 Male, age 66, unknown 317.7
1923 Female, age 72, unknown 278.2
Paraventricular nucleus
nTPM: 300.4
2700 Male, age 62, unknown 300.4
Preoptic area
nTPM: 206.5
2414 Female, age 72, unknown 348.0
1861 Female, age 42, unknown 199.1
1907 Male, age 80, right hemisphere 72.5
Supraoptic nucleus
nTPM: 209.7
2043 Male, age 62, unknown 260.3
1894 Female, age 72, unknown 186.6
2835 Female, age 72, unknown 182.3
Ventromedial nucleus
nTPM: 35.6
1982 Female, age 72, unknown 38.8
1822 Female, age 42, unknown 32.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 232.3
Samples: 257

Max nTPM: 1123.2
Min nTPM: 23.0
Std nTPM: 182.8
Median nTPM: 173.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1123.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 973.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 825.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 804.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 790.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 747.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 732.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 730.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 707.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 684.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 670.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 667.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 619.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 597.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 576.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 574.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 569.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 559.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 542.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 540.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 538.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 534.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 528.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 521.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 511.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 506.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 494.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 492.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 464.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 460.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 455.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 448.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 443.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 430.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 426.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 423.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 418.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 400.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 397.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 391.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 389.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 381.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 373.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 366.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 366.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 362.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 361.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 349.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 347.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 345.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 345.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 341.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 337.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 334.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 328.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 328.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 327.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 325.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 324.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 322.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 308.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 307.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 306.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 306.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 301.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 295.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 293.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 284.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 283.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 281.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 278.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 278.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 276.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 273.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 273.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 273.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 272.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 259.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 256.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 256.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 254.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 253.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 252.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 251.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 249.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 249.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 248.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 243.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 241.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 241.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 240.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 238.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 236.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 225.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 223.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 221.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 219.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 219.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 218.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 217.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 210.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 209.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 208.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 205.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 204.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 203.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 202.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 202.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 200.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 197.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 196.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 195.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 195.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 191.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 190.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 188.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 188.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 187.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 187.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 185.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 185.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 182.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 181.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 180.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 179.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 175.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 174.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 174.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 173.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 170.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 168.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 167.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 167.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 164.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 164.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 162.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 161.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 161.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 161.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 158.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 157.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 154.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 154.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 154.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 153.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 153.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 152.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 149.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 147.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 146.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 145.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 143.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 143.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 142.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 140.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 139.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 138.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 138.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 138.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 137.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 137.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 136.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 134.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 134.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 133.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 133.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 131.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 131.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 130.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 130.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 128.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 127.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 126.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 124.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 121.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 119.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 118.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 117.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 117.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 116.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 115.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 114.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 114.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 113.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 113.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 112.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 111.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 110.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 110.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 109.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 109.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 108.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 107.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 107.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 106.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 104.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 101.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 98.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 96.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 96.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 96.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 95.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 94.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 94.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 93.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 92.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 91.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 90.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 88.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 88.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 88.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 88.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 87.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 84.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 83.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 82.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 81.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 79.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 79.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 78.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 77.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 77.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 75.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 75.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 72.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 72.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 72.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 71.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 71.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 70.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 69.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 69.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 68.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 68.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 67.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 67.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 63.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 62.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 61.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 59.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 59.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 55.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 53.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 52.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 51.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 48.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 42.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 41.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 32.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 28.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 27.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 23.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 277.7
Samples: 4

Max nTPM: 310.2
Min nTPM: 219.8
Sample A Female 300.7
Sample B Female 310.2
Sample C Male 279.9
Sample D Male 219.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 5.5
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.7
Sample A Male 4.7
Sample B Male 6.5
Sample C Female 5.8
Sample D Female 5.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.1
68522503 Antisense, RP_050118_02_B09, Mouse strain C57BL/6J (56 days, male) 0.1

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