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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RNASE1
EVOLUTIONARY AMYGDALA Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:283.4 nTPM
HPA Brain:250.9 nTPM
GTEx:283.4 nTPM
FANTOM5:168.5 Scaled Tags Per Million
Macaque:74.7 nTPM
Mouse:0.6 nTPM
Pig:375.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.9
Sample id Sample description nTPM
Basal amygdala
nTPM: 183.0
2827 Female, age 67, right hemisphere 242.2
2685 Female, age 94, left hemisphere 210.6
2609 Male, age 75, right hemisphere 197.5
2110 Male, age 80, left hemisphere 187.8
1955 Male, age 76, both hemispheres 173.5
2243 Female, age 91, right hemisphere 86.5
Central amygdala
nTPM: 234.3
2826 Female, age 94, left hemisphere 329.7
1905 Male, age 76, both hemispheres 236.0
2239 Male, age 80, left hemisphere 211.0
2515 Male, age 75, right hemisphere 205.1
2701 Female, age 91, right hemisphere 189.6
Corticomedial amygdala
nTPM: 141.4
2428 Male, age 75, right hemisphere 219.1
2429 Female, age 94, left hemisphere 191.8
2535 Female, age 67, right hemisphere 144.9
2240 Male, age 76, both hemispheres 135.1
2829 Male, age 80, left hemisphere 104.9
2242 Female, age 91, right hemisphere 52.7
Lateral amygdala
nTPM: 250.9
2830 Female, age 67, right hemisphere 315.6
2516 Male, age 75, right hemisphere 285.6
2534 Female, age 94, left hemisphere 262.5
2256 Male, age 80, left hemisphere 260.8
1883 Male, age 76, both hemispheres 220.7
2255 Female, age 91, right hemisphere 160.5

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 283.4
Samples: 181

Max nTPM: 977.5
Min nTPM: 53.9
Std nTPM: 149.1
Median nTPM: 247.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 977.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 775.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 670.0
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 659.5
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 658.8
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 656.5
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 654.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 604.0
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 602.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 546.0
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 545.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 542.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 537.7
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 524.6
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 521.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 520.7
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 504.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 500.7
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 483.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 483.3
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 473.9
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 473.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 472.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 457.8
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 446.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 411.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 407.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 398.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 398.3
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 395.8
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 394.6
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 394.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 389.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 380.1
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 377.8
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 373.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 370.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 367.2
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 367.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 364.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 363.2
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 363.0
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 362.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 360.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 360.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 360.4
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 360.4
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 359.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 358.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 353.2
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 353.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 344.8
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 344.2
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 343.9
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 342.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 342.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 341.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 333.4
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 328.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 326.7
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 325.2
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 324.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 323.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 323.4
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 309.5
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 309.5
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 309.4
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 309.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 308.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 301.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 294.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 294.5
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 292.7
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 290.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 290.4
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 284.3
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 284.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 284.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 283.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 270.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 268.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 265.7
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 264.4
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 264.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 262.2
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 262.0
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 254.0
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 251.7
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 248.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 247.7
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 247.6
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 246.4
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 245.9
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 243.6
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 243.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 238.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 235.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 232.3
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 228.6
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 224.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 223.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 223.7
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 223.3
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 222.0
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 221.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 221.5
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 216.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 214.9
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 214.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 212.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 211.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 210.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 210.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 209.9
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 209.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 208.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 207.9
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 206.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 204.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 204.4
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 204.3
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 201.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 199.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 194.8
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 194.3
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 194.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 191.9
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 191.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 191.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 187.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 187.0
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 186.5
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 184.3
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 179.2
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 177.3
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 177.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 176.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 175.2
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 174.0
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 168.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 165.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 163.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 159.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 158.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 154.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 153.5
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 152.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 148.7
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 145.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 144.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 144.0
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 142.3
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 142.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 140.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 140.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 139.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 138.2
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 138.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 137.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 135.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 135.3
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 134.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 132.5
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 131.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 131.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 131.2
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 129.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 124.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 123.8
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 122.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 122.0
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 113.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 108.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 103.7
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 103.0
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 96.4
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 73.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 70.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 64.9
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 62.9
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 53.9
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

168.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 168.5
FF:10151-102I7 76 years, female 168.5

AMYGDALA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.7
Macaque sample Sample description nTPM
Amygdala
nTPM: 74.7
Samples: 2

Max nTPM: 88.4
Min nTPM: 61.0
Sample A 61.0
Sample B 88.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

375.7
Pig sample Sample description nTPM
Amygdala
nTPM: 375.7
Samples: 4

Max nTPM: 428.0
Min nTPM: 339.1
Sample A Female 428.0
Sample B Female 389.2
Sample C Male 346.4
Sample D Male 339.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A 0.7
Sample B 0.4
Sample C 0.8
Sample D 0.5

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