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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

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  • EVOLUTION

  • RNASE1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:232.4 nTPM
GTEx:417.4 nTPM
FANTOM5:122.6 Scaled Tags Per Million
Macaque:127.9 nTPM
Pig:239.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.4
Sample id Sample description nTPM
Putamen
nTPM: 232.4
2482 Female, age 94, left hemisphere 372.3
1829 Male, age 74, unknown 307.1
2489 Female, age 72, unknown 247.1
2647 Male, age 75, left hemisphere 213.1
1937 Female, age 91, right hemisphere 209.0
2466 Female, age 79, unknown 174.0
1838 Male, age 80, right hemisphere 104.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

417.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 417.4
Samples: 254

Max nTPM: 1247.0
Min nTPM: 71.4
Std nTPM: 183.2
Median nTPM: 401.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1247.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1158.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1071.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1039.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 871.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 844.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 783.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 775.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 742.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 741.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 728.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 724.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 708.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 700.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 694.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 693.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 690.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 690.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 686.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 680.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 672.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 670.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 670.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 665.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 664.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 664.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 660.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 656.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 646.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 646.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 643.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 638.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 634.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 628.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 625.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 621.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 616.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 607.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 599.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 596.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 589.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 572.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 565.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 561.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 557.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 557.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 557.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 556.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 555.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 555.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 549.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 548.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 545.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 542.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 540.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 540.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 539.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 535.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 533.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 532.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 529.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 527.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 526.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 524.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 523.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 519.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 513.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 499.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 499.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 498.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 497.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 495.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 490.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 487.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 485.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 485.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 485.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 483.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 480.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 479.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 479.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 476.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 475.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 469.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 468.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 466.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 466.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 465.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 464.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 462.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 460.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 460.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 455.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 455.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 451.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 450.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 450.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 447.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 444.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 441.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 436.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 435.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 434.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 434.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 434.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 433.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 432.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 431.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 427.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 425.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 424.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 423.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 423.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 421.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 421.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 416.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 413.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 409.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 408.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 408.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 408.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 407.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 406.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 405.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 404.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 404.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 402.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 400.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 399.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 399.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 394.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 390.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 389.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 389.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 387.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 387.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 385.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 385.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 384.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 381.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 380.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 379.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 376.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 373.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 370.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 369.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 367.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 367.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 366.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 366.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 366.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 362.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 361.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 355.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 355.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 351.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 350.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 345.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 342.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 337.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 335.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 332.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 326.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 326.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 325.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 325.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 323.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 322.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 321.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 321.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 320.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 316.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 316.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 314.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 309.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 308.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 307.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 307.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 305.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 303.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 298.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 294.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 291.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 289.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 288.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 286.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 285.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 284.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 283.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 281.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 278.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 275.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 275.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 274.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 274.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 270.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 269.4
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 269.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 269.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 267.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 264.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 263.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 263.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 263.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 262.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 259.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 259.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 258.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 256.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 249.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 248.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 248.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 241.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 240.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 240.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 239.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 236.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 236.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 235.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 230.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 230.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 228.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 228.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 227.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 226.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 225.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 225.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 222.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 213.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 211.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 199.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 198.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 197.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 196.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 193.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 184.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 180.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 173.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 167.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 166.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 164.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 164.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 160.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 159.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 153.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 149.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 148.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 147.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 141.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 129.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 111.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 100.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 97.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 71.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

122.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 122.6
FF:10176-103C5 60 years, female 122.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.9
Macaque sample Sample description nTPM
Putamen
nTPM: 127.9
Samples: 2

Max nTPM: 143.7
Min nTPM: 112.2
Sample A 112.2
Sample B 143.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.9
Pig sample Sample description nTPM
Putamen
nTPM: 239.9
Samples: 3

Max nTPM: 263.2
Min nTPM: 197.4
Sample B Female 197.4
Sample C Male 263.2
Sample D Male 259.0

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