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ATP5IF1
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  • TISSUE

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  • ATP5IF1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:382.4 nTPM
HPA Brain:61.3 nTPM
GTEx:382.4 nTPM
Pig:201.1 nTPM
Mouse:460.6 nTPM
Allen mouse:11.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 46.7
2226 Male, age 75, left hemisphere 50.5
1961 Female, age 42, unknown 42.8
Dorsomedial nucleus
nTPM: 37.2
1989 Male, age 62, unknown 39.1
2041 Female, age 72, unknown 38.4
2017 Female, age 42, unknown 34.1
Lateral hypothalamic area
nTPM: 52.7
2228 Male, age 66, unknown 71.1
1791 Male, age 80, right hemisphere 52.4
2271 Male, age 75, both hemispheres 45.2
2412 Male, age 62, unknown 41.9
Mammillary body
nTPM: 40.3
1923 Female, age 72, unknown 55.6
1948 Female, age 72, unknown 42.2
2413 Male, age 66, unknown 39.1
1945 Male, age 80, right hemisphere 34.6
1834 Female, age 42, unknown 30.2
Paraventricular nucleus
nTPM: 61.3
2700 Male, age 62, unknown 61.3
Preoptic area
nTPM: 48.6
1907 Male, age 80, right hemisphere 53.3
2414 Female, age 72, unknown 49.5
1861 Female, age 42, unknown 43.0
Supraoptic nucleus
nTPM: 42.9
2835 Female, age 72, unknown 54.6
1894 Female, age 72, unknown 40.2
2043 Male, age 62, unknown 33.9
Ventromedial nucleus
nTPM: 47.0
1982 Female, age 72, unknown 53.8
1822 Female, age 42, unknown 40.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

382.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 382.4
Samples: 257

Max nTPM: 785.1
Min nTPM: 156.4
Std nTPM: 107.1
Median nTPM: 378.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 785.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 710.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 679.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 654.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 629.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 604.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 595.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 576.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 574.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 573.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 567.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 556.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 556.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 552.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 550.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 550.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 547.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 547.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 546.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 544.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 541.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 541.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 538.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 532.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 525.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 524.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 513.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 512.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 508.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 506.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 506.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 505.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 500.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 497.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 494.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 494.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 488.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 487.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 487.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 486.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 485.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 483.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 478.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 478.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 475.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 475.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 473.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 473.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 473.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 471.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 469.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 468.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 464.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 464.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 462.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 460.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 459.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 459.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 457.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 456.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 455.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 455.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 451.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 449.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 448.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 447.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 447.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 447.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 444.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 444.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 443.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 443.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 442.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 440.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 437.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 437.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 435.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 434.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 434.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 432.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 432.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 432.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 430.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 429.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 429.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 428.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 427.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 424.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 423.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 422.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 421.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 420.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 418.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 417.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 417.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 417.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 416.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 413.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 413.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 410.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 409.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 407.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 407.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 406.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 405.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 404.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 403.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 402.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 401.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 401.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 400.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 396.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 395.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 395.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 394.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 393.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 391.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 391.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 388.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 388.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 386.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 383.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 383.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 382.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 380.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 380.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 379.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 378.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 378.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 378.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 376.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 375.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 373.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 372.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 371.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 371.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 370.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 367.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 366.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 366.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 364.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 364.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 363.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 361.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 360.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 359.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 358.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 358.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 355.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 354.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 354.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 354.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 352.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 352.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 349.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 348.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 348.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 347.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 347.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 345.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 345.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 344.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 343.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 342.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 341.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 340.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 339.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 339.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 336.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 334.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 332.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 331.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 330.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 329.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 329.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 328.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 328.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 325.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 325.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 324.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 323.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 321.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 321.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 319.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 319.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 319.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 319.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 317.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 317.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 315.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 314.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 313.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 313.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 312.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 312.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 309.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 309.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 309.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 307.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 305.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 302.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 300.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 299.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 297.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 297.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 297.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 295.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 294.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 291.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 288.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 288.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 288.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 286.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 281.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 280.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 277.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 275.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 275.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 274.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 273.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 271.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 268.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 264.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 260.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 258.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 258.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 255.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 254.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 251.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 250.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 245.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 244.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 243.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 229.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 228.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 227.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 227.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 222.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 220.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 217.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 215.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 214.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 211.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 210.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 201.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 200.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 190.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 190.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 184.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 183.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 183.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 181.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 177.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 169.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 165.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 157.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 156.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 201.1
Samples: 4

Max nTPM: 260.0
Min nTPM: 159.0
Sample A Female 260.0
Sample B Female 207.5
Sample C Male 178.0
Sample D Male 159.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

460.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 460.7
Samples: 4

Max nTPM: 527.7
Min nTPM: 423.3
Sample A Male 444.4
Sample B Male 527.7
Sample C Female 447.2
Sample D Female 423.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.3
75774682 Antisense, RP_060530_01_D07, Mouse strain C57BL/6J (56 days, male) 12.4
67978746 Antisense, RP_040923_01_G06, Mouse strain C57BL/6J (56 days, male) 10.2

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