HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:88.6 nTPM
HPA Brain:173.5 nTPM
GTEx:88.6 nTPM
FANTOM5:198.6 Scaled Tags Per Million
Pig:110.8 nTPM
Mouse:185.4 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000289Antibody CAB019435Antibody CAB073410
Glial cells MediumMediumNot detected
Neuronal cells Not detectedLowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 173.5
Sample id Sample description nTPM
Hippocampus
nTPM: 160.1
1898 Male, age 80, left hemisphere 175.3
1855 Male, age 76, left hemisphere 168.9
2529 Female, age 94, left hemisphere 163.7
2621 Female, age 67, right hemisphere 161.1
2148 Female, age 91, left hemisphere 152.2
1911 Female, age 85, right hemisphere 139.1
Dentate gyrus
nTPM: 167.5
2010 Male, age 76, both hemispheres 190.8
2530 Female, age 94, left hemisphere 168.8
2528 Male, age 74, both hemispheres 168.5
2531 Female, age 67, both hemispheres 161.1
2246 Female, age 85, both hemispheres 158.3
1927 Female, age 91, both hemispheres 157.8
Entorhinal gyrus
nTPM: 158.6
2764 Male, age 80, right hemisphere 182.7
2613 Female, age 94, left hemisphere 159.8
2117 Female, age 91, right hemisphere 158.9
1938 Female, age 85, left hemisphere 153.5
1787 Male, age 76, left hemisphere 149.1
2686 Male, age 75, right hemisphere 147.7
Hippocampus, CA1
nTPM: 172.6
2749 Male, age 80, left hemisphere 196.8
2045 Male, age 76, both hemispheres 180.5
1873 Female, age 85, both hemispheres 164.3
2082 Female, age 91, right hemisphere 164.3
2527 Male, age 74, both hemispheres 157.2
Hippocampus, CA2
nTPM: 163.5
1963 Male, age 80, left hemisphere 181.6
1892 Male, age 76, both hemispheres 165.0
2249 Male, age 74, both hemispheres 164.2
1940 Female, age 85, left hemisphere 160.3
2437 Female, age 94, left hemisphere 159.0
2113 Female, age 91, right hemisphere 151.4
Hippocampus, CA3
nTPM: 167.1
2436 Male, age 74, both hemispheres 202.0
2620 Female, age 94, left hemisphere 182.1
1867 Male, age 76, both hemispheres 159.4
2137 Male, age 80, left hemisphere 157.8
2861 Female, age 67, both hemispheres 155.2
1891 Female, age 85, both hemispheres 145.8
Parahippocampal cortex
nTPM: 161.2
1850 Male, age 80, both hemispheres 175.5
2018 Male, age 76, both hemispheres 167.7
2532 Female, age 72, left hemisphere 167.0
2693 Female, age 94, both hemispheres 165.3
1933 Female, age 85, both hemispheres 164.0
1990 Female, age 91, right hemisphere 157.6
2245 Female, age 91, both hemispheres 156.0
2622 Female, age 67, right hemisphere 154.3
2250 Female, age 67, right hemisphere 152.8
2692 Male, age 74, both hemispheres 152.1
Perirhinal gyrus
nTPM: 173.5
1794 Male, age 80, right hemisphere 196.1
2521 Female, age 94, right hemisphere 174.3
1847 Female, age 91, left hemisphere 168.1
1841 Female, age 85, right hemisphere 166.8
2848 Male, age 76, right hemisphere 162.1
Subiculum
nTPM: 157.6
2438 Female, age 94, left hemisphere 161.7
1977 Female, age 85, both hemispheres 161.2
2042 Male, age 76, both hemispheres 161.1
2619 Male, age 74, both hemispheres 159.2
2729 Female, age 91, right hemisphere 151.9
1901 Male, age 80, both hemispheres 150.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 88.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.6
Samples: 255

Max nTPM: 125.0
Min nTPM: 56.9
Std nTPM: 13.3
Median nTPM: 88.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 125.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 122.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 121.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 121.4
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 120.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 115.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 114.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 113.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 113.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 113.2
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 113.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 198.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.6
FF:10153-102I9 76 years, female 212.3
FF:10169-103B7 60 years, female 184.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 110.8
Pig sample Sample description nTPM
Subiculum
nTPM: 104.6
Samples: 4

Max nTPM: 124.3
Min nTPM: 94.7
Sample A Female 124.3
Sample B Female 95.5
Sample C Male 103.8
Sample D Male 94.7
Dorsal hippocampus
nTPM: 107.1
Samples: 4

Max nTPM: 130.5
Min nTPM: 79.7
Sample A Female 130.5
Sample B Female 110.9
Sample C Male 107.1
Sample D Male 79.7
Entorhinal cortex
nTPM: 99.9
Samples: 4

Max nTPM: 111.4
Min nTPM: 88.2
Sample A Female 111.4
Sample B Female 98.3
Sample C Male 101.5
Sample D Male 88.2
Ventral hippocampus
nTPM: 110.8
Samples: 4

Max nTPM: 145.2
Min nTPM: 74.2
Sample A Female 111.9
Sample B Female 74.2
Sample C Male 145.2
Sample D Male 111.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 185.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 168.5
Samples: 4

Max nTPM: 189.6
Min nTPM: 156.6
Sample A Male 156.6
Sample B Male 159.6
Sample C Female 168.2
Sample D Female 189.6
Hippocampal formation
nTPM: 185.4
Samples: 4

Max nTPM: 189.3
Min nTPM: 179.9
Sample A Male 179.9
Sample B Male 186.2
Sample C Female 189.3
Sample D Female 186.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70194486 Antisense, RP_050517_01_E04, Mouse strain C57BL/6J (56 days, male) 0.0

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