A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.2
nTPM
Monaco:
137.5
nTPM
Schmiedel:
114.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
82.2
HPA sample
nTPM
Classical monocyte nTPM: 19.7
Samples: 6
Max nTPM: 24.9
Min nTPM: 11.6
P10809_1003
11.6
P10809_1020
24.9
P10809_1039
20.3
P10809_1058
19.0
P10809_1080
19.5
P10809_1107
22.6
Intermediate monocyte nTPM: 46.3
Samples: 6
Max nTPM: 66.5
Min nTPM: 26.6
P10809_1004
28.0
P10809_1023
66.5
P10809_1042
56.5
P10809_1061
53.2
P10809_1081
26.6
P10809_1108
47.2
Non-classical monocyte nTPM: 82.1
Samples: 5
Max nTPM: 185.6
Min nTPM: 31.1
P10809_1005
31.1
P10809_1053
77.8
P10809_1072
185.6
P10809_1082
47.7
P10809_1109
68.5
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
137.5
Monaco sample
nTPM
Classical monocyte nTPM: 50.3
Samples: 4
Max nTPM: 59.0
Min nTPM: 33.9
RHH5313_R3680
33.9
RHH5221_R3593
59.0
RHH5250_R3622
54.7
RHH5279_R3651
53.6
Intermediate monocyte nTPM: 95.7
Samples: 4
Max nTPM: 109.7
Min nTPM: 82.8
RHH5314_R3681
83.5
RHH5222_R3594
106.9
RHH5251_R3623
109.7
RHH5280_R3652
82.8
Non-classical monocyte nTPM: 137.5
Samples: 4
Max nTPM: 169.6
Min nTPM: 116.4
RHH5315_R3682
123.4
RHH5223_R3595
116.4
RHH5252_R3624
169.6
RHH5281_R3653
140.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
114.1
Schmiedel sample id
TPM
Classical monocyte TPM: 28.0
Samples: 91
Max TPM: 34.0
Min TPM: 21.3
MONOCYTES_1
34.0
MONOCYTES_2
33.8
MONOCYTES_3
33.7
MONOCYTES_4
33.4
MONOCYTES_5
33.3
MONOCYTES_6
33.2
MONOCYTES_7
32.9
MONOCYTES_8
32.8
MONOCYTES_9
32.3
MONOCYTES_10
31.8
MONOCYTES_11
31.3
MONOCYTES_12
31.3
MONOCYTES_13
31.3
MONOCYTES_14
31.2
MONOCYTES_15
31.1
MONOCYTES_16
30.8
MONOCYTES_17
30.6
MONOCYTES_18
30.2
MONOCYTES_19
30.1
MONOCYTES_20
30.1
MONOCYTES_21
29.8
MONOCYTES_22
29.7
MONOCYTES_23
29.7
MONOCYTES_24
29.7
MONOCYTES_25
29.5
MONOCYTES_26
29.5
MONOCYTES_27
29.5
MONOCYTES_28
29.5
MONOCYTES_29
29.4
MONOCYTES_30
29.4
MONOCYTES_31
29.3
MONOCYTES_32
29.2
MONOCYTES_33
29.2
MONOCYTES_34
28.9
MONOCYTES_35
28.9
MONOCYTES_36
28.8
MONOCYTES_37
28.7
MONOCYTES_38
28.6
MONOCYTES_39
28.6
MONOCYTES_40
28.6
MONOCYTES_41
28.6
MONOCYTES_42
28.5
MONOCYTES_43
28.5
MONOCYTES_44
28.5
MONOCYTES_45
28.4
MONOCYTES_46
28.2
MONOCYTES_47
28.2
MONOCYTES_48
28.1
MONOCYTES_49
28.1
MONOCYTES_50
28.1
MONOCYTES_51
28.0
MONOCYTES_52
27.9
MONOCYTES_53
27.7
MONOCYTES_54
27.7
MONOCYTES_55
27.5
MONOCYTES_56
27.3
MONOCYTES_57
27.2
MONOCYTES_58
27.1
MONOCYTES_59
27.1
MONOCYTES_60
27.1
MONOCYTES_61
27.0
MONOCYTES_62
27.0
MONOCYTES_63
26.8
MONOCYTES_64
26.8
MONOCYTES_65
26.7
MONOCYTES_66
26.5
MONOCYTES_67
26.5
MONOCYTES_68
26.4
MONOCYTES_69
26.1
MONOCYTES_70
25.9
MONOCYTES_71
25.6
MONOCYTES_72
25.6
MONOCYTES_73
25.5
MONOCYTES_74
25.4
MONOCYTES_75
25.3
MONOCYTES_76
25.0
MONOCYTES_77
24.5
MONOCYTES_78
24.3
MONOCYTES_79
24.1
MONOCYTES_80
24.0
MONOCYTES_81
24.0
MONOCYTES_82
23.9
MONOCYTES_83
23.7
MONOCYTES_84
23.7
MONOCYTES_85
23.1
MONOCYTES_86
23.0
MONOCYTES_87
22.8
MONOCYTES_88
21.9
MONOCYTES_89
21.7
MONOCYTES_90
21.5
MONOCYTES_91
21.3
Show allShow less
Non-classical monocyte TPM: 114.1
Samples: 90
Max TPM: 144.5
Min TPM: 93.1
M2_1
144.5
M2_2
134.7
M2_3
133.7
M2_4
131.9
M2_5
131.7
M2_6
129.7
M2_7
129.4
M2_8
128.8
M2_9
127.5
M2_10
126.0
M2_11
125.9
M2_12
125.7
M2_13
125.4
M2_14
125.0
M2_15
123.9
M2_16
123.5
M2_17
123.5
M2_18
123.3
M2_19
123.2
M2_20
123.1
M2_21
122.7
M2_22
122.5
M2_23
121.6
M2_24
120.6
M2_25
120.0
M2_26
119.7
M2_27
118.6
M2_28
118.5
M2_29
118.4
M2_30
118.2
M2_31
117.8
M2_32
117.8
M2_33
117.8
M2_34
117.0
M2_35
116.9
M2_36
116.4
M2_37
116.3
M2_38
116.1
M2_39
116.1
M2_40
115.8
M2_41
115.5
M2_42
115.4
M2_43
115.3
M2_44
115.3
M2_45
115.2
M2_46
114.8
M2_47
113.9
M2_48
113.8
M2_49
113.2
M2_50
113.1
M2_51
113.0
M2_52
112.6
M2_53
112.5
M2_54
112.4
M2_55
112.3
M2_56
112.0
M2_57
111.5
M2_58
111.4
M2_59
111.3
M2_60
111.1
M2_61
110.4
M2_62
110.3
M2_63
110.1
M2_64
109.1
M2_65
107.7
M2_66
106.9
M2_67
106.2
M2_68
105.4
M2_69
105.0
M2_70
104.0
M2_71
103.9
M2_72
103.9
M2_73
103.1
M2_74
103.0
M2_75
102.9
M2_76
102.8
M2_77
102.8
M2_78
102.2
M2_79
101.7
M2_80
100.3
M2_81
100.2
M2_82
100.0
M2_83
99.6
M2_84
98.9
M2_85
97.6
M2_86
97.6
M2_87
97.6
M2_88
95.0
M2_89
94.9
M2_90
93.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
