HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:943.2 nTPM
HPA Brain:218.9 nTPM
GTEx:943.2 nTPM
FANTOM5:62.2 Scaled Tags Per Million
Pig:399.4 nTPM
Mouse:357.8 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002649
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 218.9
Sample id Sample description nTPM
Hippocampus
nTPM: 218.9
2529 Female, age 94, left hemisphere 272.5
1898 Male, age 80, left hemisphere 241.5
2621 Female, age 67, right hemisphere 232.3
1855 Male, age 76, left hemisphere 197.1
1911 Female, age 85, right hemisphere 196.7
2148 Female, age 91, left hemisphere 173.4
Dentate gyrus
nTPM: 204.1
2530 Female, age 94, left hemisphere 267.8
2246 Female, age 85, both hemispheres 225.0
2010 Male, age 76, both hemispheres 214.9
2531 Female, age 67, both hemispheres 205.8
1927 Female, age 91, both hemispheres 168.1
2528 Male, age 74, both hemispheres 143.0
Entorhinal gyrus
nTPM: 200.1
2686 Male, age 75, right hemisphere 221.3
1787 Male, age 76, left hemisphere 218.5
2117 Female, age 91, right hemisphere 205.9
2764 Male, age 80, right hemisphere 198.4
1938 Female, age 85, left hemisphere 192.4
2613 Female, age 94, left hemisphere 164.1
Hippocampus, CA1
nTPM: 201.6
2527 Male, age 74, both hemispheres 222.8
2749 Male, age 80, left hemisphere 213.0
2045 Male, age 76, both hemispheres 192.9
1873 Female, age 85, both hemispheres 189.9
2082 Female, age 91, right hemisphere 189.5
Hippocampus, CA2
nTPM: 201.5
2437 Female, age 94, left hemisphere 230.5
1892 Male, age 76, both hemispheres 217.0
1963 Male, age 80, left hemisphere 216.9
1940 Female, age 85, left hemisphere 208.6
2113 Female, age 91, right hemisphere 174.0
2249 Male, age 74, both hemispheres 161.8
Hippocampus, CA3
nTPM: 185.7
1891 Female, age 85, both hemispheres 207.8
2861 Female, age 67, both hemispheres 204.3
2436 Male, age 74, both hemispheres 194.9
1867 Male, age 76, both hemispheres 190.6
2137 Male, age 80, left hemisphere 167.0
2620 Female, age 94, left hemisphere 149.6
Parahippocampal cortex
nTPM: 201.0
2532 Female, age 72, left hemisphere 234.8
2018 Male, age 76, both hemispheres 233.1
2250 Female, age 67, right hemisphere 228.9
2245 Female, age 91, both hemispheres 221.4
1850 Male, age 80, both hemispheres 208.2
1933 Female, age 85, both hemispheres 193.8
2692 Male, age 74, both hemispheres 190.1
1990 Female, age 91, right hemisphere 187.3
2622 Female, age 67, right hemisphere 158.0
2693 Female, age 94, both hemispheres 154.5
Perirhinal gyrus
nTPM: 216.6
1794 Male, age 80, right hemisphere 232.4
1847 Female, age 91, left hemisphere 230.9
1841 Female, age 85, right hemisphere 222.7
2848 Male, age 76, right hemisphere 204.0
2521 Female, age 94, right hemisphere 193.2
Subiculum
nTPM: 208.8
2438 Female, age 94, left hemisphere 261.8
1977 Female, age 85, both hemispheres 230.3
2042 Male, age 76, both hemispheres 214.4
1901 Male, age 80, both hemispheres 197.1
2619 Male, age 74, both hemispheres 192.7
2729 Female, age 91, right hemisphere 156.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 943.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 943.2
Samples: 255

Max nTPM: 3131.3
Min nTPM: 458.0
Std nTPM: 305.5
Median nTPM: 877.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3131.3
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2139.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1828.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1772.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1744.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1706.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1684.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1660.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1645.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1624.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1620.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.2
FF:10169-103B7 60 years, female 86.2
FF:10153-102I9 76 years, female 38.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 399.4
Pig sample Sample description nTPM
Subiculum
nTPM: 345.4
Samples: 4

Max nTPM: 564.6
Min nTPM: 251.7
Sample A Female 564.6
Sample B Female 305.0
Sample C Male 260.3
Sample D Male 251.7
Dorsal hippocampus
nTPM: 399.4
Samples: 4

Max nTPM: 612.3
Min nTPM: 265.0
Sample A Female 612.3
Sample B Female 358.6
Sample C Male 361.6
Sample D Male 265.0
Entorhinal cortex
nTPM: 325.4
Samples: 4

Max nTPM: 399.2
Min nTPM: 214.3
Sample A Female 366.0
Sample B Female 399.2
Sample C Male 322.2
Sample D Male 214.3
Ventral hippocampus
nTPM: 350.4
Samples: 4

Max nTPM: 487.2
Min nTPM: 287.3
Sample A Female 487.2
Sample B Female 287.5
Sample C Male 339.6
Sample D Male 287.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 357.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 332.1
Samples: 4

Max nTPM: 343.8
Min nTPM: 316.3
Sample A Male 339.4
Sample B Male 328.7
Sample C Female 343.8
Sample D Female 316.3
Hippocampal formation
nTPM: 357.8
Samples: 4

Max nTPM: 401.7
Min nTPM: 313.2
Sample A Male 401.7
Sample B Male 313.2
Sample C Female 350.4
Sample D Female 365.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69261404 Antisense, RP_050118_01_D07, Mouse strain C57BL/6J (56 days, male) 0.0

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