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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:173.8 nTPM
HPA Brain:249.5 nTPM
GTEx:173.8 nTPM
FANTOM5:168.4 Scaled Tags Per Million
Macaque:136.9 nTPM
Mouse:62.0 nTPM
Rat:108.9 nTPM
Pig:74.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 63804
Sample Intensity
Spinal cord_01
83109
Spinal cord_02
76121
Spinal cord_03
67050
Spinal cord_04
64680
Spinal cord_05
59443
Spinal cord_06
62929
Spinal cord_07
60137
Spinal cord_08
55070

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.5
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 237.3
2193 Male, age 75, both hemispheres 296.9
2819 Male, age 47, both hemispheres 274.2
2818 Female, age 79, both hemispheres 212.4
2734 Male, age 80, both hemispheres 165.6
Cervical spinal cord, central gray
nTPM: 194.5
1981 Female, age 72, midline 260.0
2565 Male, age 75, midline 222.0
2048 Male, age 55, midline 183.0
2194 Female, age 79, both hemispheres 166.9
2816 Male, age 47, midline 140.4
Cervical spinal cord, dorsal horn
nTPM: 245.5
2069 Male, age 47, both hemispheres 310.0
2296 Male, age 66, both hemispheres 291.8
2173 Female, age 72, unknown 275.5
2297 Male, age 75, both hemispheres 206.0
2721 Male, age 90, both hemispheres 201.2
1877 Male, age 55, unknown 188.7
Cervical spinal cord, ventral horn
nTPM: 207.2
2098 Female, age 72, unknown 269.0
2480 Male, age 75, both hemispheres 251.1
2809 Male, age 90, both hemispheres 235.7
2068 Male, age 55, unknown 178.3
2295 Male, age 66, both hemispheres 171.0
2820 Female, age 79, both hemispheres 138.4
Dorsal funiculus (white matter)
nTPM: 235.8
2128 Male, age 75, both hemispheres 292.8
2812 Male, age 66, both hemispheres 245.3
2810 Male, age 90, both hemispheres 217.2
2064 Female, age 79, both hemispheres 216.4
2817 Male, age 47, both hemispheres 207.3
Lateral funiculus (white matter)
nTPM: 249.5
2192 Male, age 75, both hemispheres 273.7
2099 Male, age 90, both hemispheres 273.6
2294 Male, age 66, both hemispheres 230.3
2094 Female, age 79, both hemispheres 220.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 173.8
Samples: 204

Max nTPM: 270.8
Min nTPM: 101.6
Std nTPM: 32.7
Median nTPM: 171.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 270.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 270.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 266.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 264.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 264.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 258.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 251.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 245.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 243.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 240.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 233.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 232.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 232.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 228.6
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 226.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 225.7
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 223.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 220.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 216.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 215.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 214.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 213.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 212.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 211.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 211.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 210.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 210.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 209.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 208.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 208.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 206.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 205.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 205.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 205.5
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 202.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 202.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 200.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 200.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 200.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 199.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 199.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 199.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 199.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 198.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 197.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 196.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 196.6
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 196.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 195.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 195.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 195.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 194.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 193.8
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 193.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 193.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 190.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 189.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 188.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 188.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 187.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 187.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 186.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 186.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 186.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 185.4
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 183.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 182.7
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 181.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 181.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 180.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 180.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 179.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 179.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 179.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 179.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 179.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 179.4
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 178.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 177.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 177.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 177.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 176.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 176.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 176.6
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 176.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 176.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 175.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 175.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 175.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 175.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 174.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 174.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 174.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 174.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 173.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 173.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 173.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 172.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 172.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 172.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 171.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 171.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 171.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 170.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 170.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 170.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 170.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 169.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 169.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 168.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 167.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 166.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 165.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 165.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 164.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 164.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 164.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 164.1
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 163.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 163.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 163.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 163.2
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 161.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 161.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 160.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 160.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 160.1
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 159.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 159.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 158.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 158.5
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 158.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 157.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 157.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 157.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 156.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 156.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 156.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 156.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 155.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 155.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 155.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 154.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 153.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 152.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 151.9
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 151.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 151.0
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 150.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 150.6
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 149.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 148.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 148.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 148.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 148.2
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 148.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 147.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 147.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 147.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 147.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 146.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 145.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 145.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 145.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 144.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 144.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 144.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 144.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 143.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 143.2
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 143.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 142.9
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 141.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 141.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 140.9
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 140.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 140.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 140.3
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 139.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 138.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 138.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 136.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 136.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 136.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 136.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 135.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 135.4
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 135.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 134.1
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 133.7
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 132.5
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 131.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 130.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 130.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 127.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 126.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 125.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 124.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 124.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 121.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 117.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 112.7
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 107.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 101.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

168.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 168.4
FF:10181-103D1 60 years, female 189.8
FF:10159-103A6 76 years, female 146.9

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.9
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 116.4
Samples: 2

Max nTPM: 121.0
Min nTPM: 111.7
Sample A 121.0
Sample B 111.7
Ventral spinal cord
nTPM: 136.9
Samples: 1

Max nTPM: 136.9
Min nTPM: 136.9
Sample A 136.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 65.2
Samples: 4

Max nTPM: 70.3
Min nTPM: 62.3
Sample A Female 70.3
Sample B Female 65.0
Sample C Male 63.0
Sample D Male 62.3
Ventral spinal cord
nTPM: 74.4
Samples: 4

Max nTPM: 84.4
Min nTPM: 70.4
Sample A Female 71.1
Sample B Female 84.4
Sample C Male 71.8
Sample D Male 70.4

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.0
Mouse sample Sample description nTPM
Spinal cord
nTPM: 62.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 57.0
Sample A 67.4
Sample B 57.0
Sample C 59.2
Sample D 64.3

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.9
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 108.9
Samples: 4

Max nTPM: 116.3
Min nTPM: 97.6
Sample A 109.5
Sample A 112.2
Sample A 116.3
Sample A 97.6

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