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TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:230.1 nTPM
HPA Brain:310.7 nTPM
GTEx:230.1 nTPM
Pig:84.6 nTPM
Mouse:226.3 nTPM
Allen mouse:16.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

310.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 310.7
2226 Male, age 75, left hemisphere 361.9
1961 Female, age 42, unknown 259.5
Dorsomedial nucleus
nTPM: 222.8
2041 Female, age 72, unknown 277.7
2017 Female, age 42, unknown 198.1
1989 Male, age 62, unknown 192.7
Lateral hypothalamic area
nTPM: 283.6
2271 Male, age 75, both hemispheres 319.4
1791 Male, age 80, right hemisphere 303.5
2228 Male, age 66, unknown 302.0
2412 Male, age 62, unknown 209.5
Mammillary body
nTPM: 222.9
1923 Female, age 72, unknown 317.9
2413 Male, age 66, unknown 223.8
1948 Female, age 72, unknown 200.2
1945 Male, age 80, right hemisphere 192.2
1834 Female, age 42, unknown 180.5
Paraventricular nucleus
nTPM: 194.8
2700 Male, age 62, unknown 194.8
Preoptic area
nTPM: 218.3
1907 Male, age 80, right hemisphere 275.7
1861 Female, age 42, unknown 194.0
2414 Female, age 72, unknown 185.3
Supraoptic nucleus
nTPM: 241.2
1894 Female, age 72, unknown 284.3
2043 Male, age 62, unknown 235.0
2835 Female, age 72, unknown 204.4
Ventromedial nucleus
nTPM: 257.9
1982 Female, age 72, unknown 274.9
1822 Female, age 42, unknown 240.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 230.1
Samples: 257

Max nTPM: 471.8
Min nTPM: 104.2
Std nTPM: 61.7
Median nTPM: 219.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 471.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 445.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 417.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 398.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 373.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 372.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 361.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 354.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 354.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 350.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 348.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 339.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 338.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 338.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 331.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 330.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 328.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 327.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 326.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 325.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 325.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 321.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 318.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 317.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 313.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 312.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 309.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 308.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 305.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 304.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 302.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 302.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 301.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 300.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 299.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 297.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 297.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 297.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 297.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 297.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 296.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 295.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 293.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 291.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 291.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 291.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 289.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 289.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 289.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 287.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 285.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 284.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 281.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 279.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 278.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 278.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 276.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 275.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 275.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 275.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 274.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 274.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 269.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 269.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 268.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 267.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 267.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 266.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 264.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 263.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 262.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 261.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 261.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 261.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 260.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 260.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 258.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 257.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 255.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 255.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 254.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 253.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 252.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 251.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 251.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 250.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 248.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 248.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 248.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 247.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 247.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 247.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 247.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 246.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 245.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 245.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 244.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 243.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 242.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 240.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 240.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 239.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 239.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 238.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 238.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 237.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 236.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 234.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 233.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 233.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 232.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 229.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 226.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 226.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 226.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 226.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 225.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 224.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 224.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 224.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 223.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 221.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 221.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 221.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 220.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 220.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 220.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 219.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 219.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 218.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 217.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 217.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 215.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 215.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 215.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 215.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 214.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 214.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 213.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 211.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 210.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 210.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 210.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 209.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 208.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 208.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 208.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 207.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 207.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 207.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 207.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 206.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 206.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 205.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 205.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 203.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 203.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 202.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 202.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 201.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 201.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 201.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 200.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 199.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 198.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 198.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 198.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 198.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 197.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 197.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 197.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 196.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 194.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 194.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 193.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 192.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 192.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 191.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 191.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 191.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 191.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 190.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 189.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 189.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 189.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 189.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 189.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 188.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 188.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 188.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 188.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 187.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 187.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 186.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 185.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 185.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 184.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 183.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 182.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 182.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 180.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 180.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 179.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 179.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 178.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 178.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 177.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 176.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 175.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 175.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 175.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 174.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 174.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 173.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 173.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 172.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 171.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 171.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 171.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 170.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 168.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 168.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 167.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 167.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 165.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 165.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 165.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 165.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 165.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 165.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 162.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 161.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 159.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 158.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 157.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 157.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 154.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 154.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 154.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 153.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 153.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 148.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 146.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 145.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 145.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 144.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 141.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 138.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 135.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 128.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 126.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 125.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 125.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 122.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 121.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 116.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 104.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 84.6
Samples: 4

Max nTPM: 111.8
Min nTPM: 70.2
Sample A Female 111.8
Sample B Female 82.0
Sample C Male 70.2
Sample D Male 74.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 226.4
Samples: 4

Max nTPM: 263.4
Min nTPM: 201.4
Sample A Male 216.4
Sample B Male 263.4
Sample C Female 224.2
Sample D Female 201.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.9
2518 Antisense, RP_040420_01_F04, Mouse strain C57BL/6J (56 days, male) 16.9
2517 Antisense, RP_040420_01_F04, Mouse strain C57BL/6J (56 days, male) 9.7

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