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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • WBP2
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:284.4 nTPM
GTEx:275.1 nTPM
FANTOM5:707.7 Scaled Tags Per Million
Macaque:132.0 nTPM
Pig:365.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

284.4
Sample id Sample description nTPM
Putamen
nTPM: 284.4
2647 Male, age 75, left hemisphere 338.0
2482 Female, age 94, left hemisphere 306.0
1829 Male, age 74, unknown 301.5
1838 Male, age 80, right hemisphere 292.0
1937 Female, age 91, right hemisphere 274.9
2489 Female, age 72, unknown 243.1
2466 Female, age 79, unknown 235.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 275.1
Samples: 254

Max nTPM: 481.2
Min nTPM: 165.7
Std nTPM: 47.2
Median nTPM: 271.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 481.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 465.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 418.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 411.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 411.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 407.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 404.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 386.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 385.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 382.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 367.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 365.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 358.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 356.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 349.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 349.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 344.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 343.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 342.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 338.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 337.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 337.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 336.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 335.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 334.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 332.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 330.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 330.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 329.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 326.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 323.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 323.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 319.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 317.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 317.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 317.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 314.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 314.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 312.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 312.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 311.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 310.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 310.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 310.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 309.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 309.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 309.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 309.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 306.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 306.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 306.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 305.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 303.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 303.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 302.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 301.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 300.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 300.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 299.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 299.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 299.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 299.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 298.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 297.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 297.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 296.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 296.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 296.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 296.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 295.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 294.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 294.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 291.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 291.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 291.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 290.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 290.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 288.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 288.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 287.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 287.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 287.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 286.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 286.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 286.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 285.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 285.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 285.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 285.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 285.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 284.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 284.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 283.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 283.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 283.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 283.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 283.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 282.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 282.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 282.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 281.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 281.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 281.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 281.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 280.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 280.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 280.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 279.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 278.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 278.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 278.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 275.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 275.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 275.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 275.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 274.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 274.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 273.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 273.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 272.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 272.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 272.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 272.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 272.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 271.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 271.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 271.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 270.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 268.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 268.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 268.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 268.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 267.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 267.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 266.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 265.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 265.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 265.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 265.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 265.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 265.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 264.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 264.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 264.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 264.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 264.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 264.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 264.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 264.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 263.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 263.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 263.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 263.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 261.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 261.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 260.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 260.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 260.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 260.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 259.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 259.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 258.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 258.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 257.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 256.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 256.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 255.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 254.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 254.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 253.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 253.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 253.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 252.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 252.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 252.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 252.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 251.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 249.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 248.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 247.8
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 247.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 247.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 246.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 245.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 245.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 245.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 244.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 244.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 243.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 243.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 242.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 242.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 241.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 241.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 241.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 241.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 240.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 240.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 240.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 240.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 240.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 240.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 239.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 239.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 239.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 237.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 237.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 237.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 237.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 237.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 235.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 235.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 235.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 235.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 233.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 233.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 233.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 233.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 232.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 232.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 230.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 229.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 229.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 228.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 227.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 226.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 226.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 225.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 225.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 224.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 224.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 223.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 223.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 223.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 221.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 220.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 216.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 214.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 213.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 211.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 210.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 209.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 209.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 208.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 199.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 196.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 192.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 189.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 189.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 180.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 175.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 175.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 170.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 165.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

707.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 707.7
FF:10176-103C5 60 years, female 707.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.0
Macaque sample Sample description nTPM
Putamen
nTPM: 132.1
Samples: 2

Max nTPM: 139.7
Min nTPM: 124.4
Sample A 124.4
Sample B 139.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

365.6
Pig sample Sample description nTPM
Putamen
nTPM: 365.6
Samples: 3

Max nTPM: 438.1
Min nTPM: 275.3
Sample B Female 275.3
Sample C Male 383.3
Sample D Male 438.1

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