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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • SNAP25
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:409.7 nTPM
GTEx:488.9 nTPM
FANTOM5:1368.7 Scaled Tags Per Million
Macaque:934.0 nTPM
Pig:1110.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

409.7
Sample id Sample description nTPM
Putamen
nTPM: 409.7
1937 Female, age 91, right hemisphere 681.8
1838 Male, age 80, right hemisphere 589.3
1829 Male, age 74, unknown 485.2
2466 Female, age 79, unknown 367.7
2647 Male, age 75, left hemisphere 287.6
2482 Female, age 94, left hemisphere 257.3
2489 Female, age 72, unknown 199.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

488.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 488.9
Samples: 254

Max nTPM: 2241.0
Min nTPM: 12.2
Std nTPM: 368.3
Median nTPM: 443.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 2241.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1841.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1307.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1288.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1281.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1240.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1233.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1173.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1140.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1121.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1119.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1104.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1102.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1088.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1077.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1055.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1032.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1032.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1029.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1029.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1028.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1023.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1022.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1016.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1010.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1005.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 993.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 977.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 973.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 969.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 963.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 958.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 944.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 944.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 942.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 931.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 931.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 922.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 914.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 910.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 909.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 901.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 886.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 873.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 872.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 862.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 862.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 840.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 826.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 808.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 808.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 807.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 807.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 792.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 791.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 785.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 784.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 776.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 775.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 766.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 765.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 734.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 734.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 734.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 732.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 726.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 717.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 713.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 713.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 708.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 699.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 691.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 675.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 675.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 675.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 669.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 660.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 659.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 658.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 656.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 653.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 652.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 630.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 627.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 619.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 615.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 615.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 610.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 607.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 605.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 601.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 599.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 595.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 593.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 584.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 578.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 578.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 576.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 575.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 568.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 566.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 565.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 559.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 559.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 557.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 553.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 552.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 551.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 550.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 530.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 521.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 520.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 517.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 514.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 510.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 507.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 499.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 489.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 488.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 487.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 485.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 481.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 475.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 472.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 469.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 452.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 443.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 442.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 441.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 437.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 421.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 418.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 417.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 406.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 406.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 400.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 394.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 391.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 386.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 377.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 375.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 375.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 375.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 374.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 372.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 372.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 361.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 344.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 343.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 343.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 341.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 337.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 332.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 326.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 322.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 318.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 318.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 312.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 297.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 287.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 287.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 285.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 277.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 265.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 265.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 252.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 252.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 241.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 234.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 231.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 231.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 223.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 218.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 217.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 214.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 202.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 202.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 198.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 197.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 196.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 196.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 195.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 190.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 188.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 187.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 184.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 172.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 172.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 172.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 163.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 162.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 161.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 151.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 149.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 148.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 139.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 137.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 137.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 136.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 135.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 131.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 121.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 120.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 115.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 114.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 114.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 114.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 110.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 98.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 97.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 96.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 95.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 94.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 86.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 86.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 84.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 80.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 79.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 78.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 74.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 74.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 73.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 73.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 72.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 72.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 65.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 65.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 57.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 54.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 54.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 53.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 51.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 51.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 49.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 46.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 44.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 41.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 31.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 28.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 28.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 27.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 24.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 23.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 22.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1368.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1368.7
FF:10176-103C5 60 years, female 1368.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

934.0
Macaque sample Sample description nTPM
Putamen
nTPM: 934.0
Samples: 2

Max nTPM: 1169.3
Min nTPM: 698.7
Sample A 698.7
Sample B 1169.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1110.2
Pig sample Sample description nTPM
Putamen
nTPM: 1110.2
Samples: 3

Max nTPM: 1518.5
Min nTPM: 897.2
Sample B Female 897.2
Sample C Male 1518.5
Sample D Male 915.0

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