HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:113.1 nTPM
HPA Brain:83.7 nTPM
GTEx:113.1 nTPM
FANTOM5:85.4 Scaled Tags Per Million
Pig:54.3 nTPM
Mouse:1.6 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045765
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 83.7
Sample id Sample description nTPM
Hippocampus
nTPM: 54.3
2529 Female, age 94, left hemisphere 65.3
1898 Male, age 80, left hemisphere 61.2
2621 Female, age 67, right hemisphere 61.2
1911 Female, age 85, right hemisphere 54.5
2148 Female, age 91, left hemisphere 45.2
1855 Male, age 76, left hemisphere 38.5
Dentate gyrus
nTPM: 66.7
2530 Female, age 94, left hemisphere 153.4
2528 Male, age 74, both hemispheres 68.7
2010 Male, age 76, both hemispheres 59.7
2246 Female, age 85, both hemispheres 44.0
2531 Female, age 67, both hemispheres 39.7
1927 Female, age 91, both hemispheres 34.6
Entorhinal gyrus
nTPM: 68.2
2117 Female, age 91, right hemisphere 122.7
2764 Male, age 80, right hemisphere 97.5
1787 Male, age 76, left hemisphere 50.4
1938 Female, age 85, left hemisphere 50.4
2613 Female, age 94, left hemisphere 47.3
2686 Male, age 75, right hemisphere 40.8
Hippocampus, CA1
nTPM: 41.1
2082 Female, age 91, right hemisphere 55.6
2527 Male, age 74, both hemispheres 52.8
2749 Male, age 80, left hemisphere 42.6
1873 Female, age 85, both hemispheres 41.6
2045 Male, age 76, both hemispheres 12.6
Hippocampus, CA2
nTPM: 65.1
1963 Male, age 80, left hemisphere 88.2
2249 Male, age 74, both hemispheres 80.6
2437 Female, age 94, left hemisphere 70.7
2113 Female, age 91, right hemisphere 60.7
1940 Female, age 85, left hemisphere 59.1
1892 Male, age 76, both hemispheres 31.7
Hippocampus, CA3
nTPM: 33.3
1891 Female, age 85, both hemispheres 65.9
1867 Male, age 76, both hemispheres 48.1
2436 Male, age 74, both hemispheres 35.6
2137 Male, age 80, left hemisphere 26.2
2620 Female, age 94, left hemisphere 12.1
2861 Female, age 67, both hemispheres 12.0
Parahippocampal cortex
nTPM: 48.4
2692 Male, age 74, both hemispheres 82.0
1990 Female, age 91, right hemisphere 74.8
2532 Female, age 72, left hemisphere 65.6
2245 Female, age 91, both hemispheres 50.7
1850 Male, age 80, both hemispheres 48.8
1933 Female, age 85, both hemispheres 48.7
2018 Male, age 76, both hemispheres 38.6
2250 Female, age 67, right hemisphere 33.3
2693 Female, age 94, both hemispheres 28.3
2622 Female, age 67, right hemisphere 13.2
Perirhinal gyrus
nTPM: 31.5
2521 Female, age 94, right hemisphere 46.3
1847 Female, age 91, left hemisphere 32.3
2848 Male, age 76, right hemisphere 29.7
1794 Male, age 80, right hemisphere 28.9
1841 Female, age 85, right hemisphere 20.4
Subiculum
nTPM: 83.7
2042 Male, age 76, both hemispheres 118.3
1901 Male, age 80, both hemispheres 116.6
2619 Male, age 74, both hemispheres 77.3
1977 Female, age 85, both hemispheres 76.2
2729 Female, age 91, right hemisphere 57.6
2438 Female, age 94, left hemisphere 56.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 113.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.1
Samples: 255

Max nTPM: 888.2
Min nTPM: 9.0
Std nTPM: 96.4
Median nTPM: 84.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 888.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 499.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 435.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 432.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 392.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 366.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 347.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 346.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 344.3
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 337.9
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 331.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.4
FF:10153-102I9 76 years, female 96.0
FF:10169-103B7 60 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.3
Pig sample Sample description nTPM
Subiculum
nTPM: 20.0
Samples: 4

Max nTPM: 28.7
Min nTPM: 15.8
Sample A Female 17.1
Sample B Female 28.7
Sample C Male 18.3
Sample D Male 15.8
Dorsal hippocampus
nTPM: 54.3
Samples: 4

Max nTPM: 77.8
Min nTPM: 19.0
Sample A Female 73.3
Sample B Female 47.0
Sample C Male 77.8
Sample D Male 19.0
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 25.1
Min nTPM: 8.2
Sample A Female 11.2
Sample B Female 25.1
Sample C Male 8.2
Sample D Male 12.0
Ventral hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 52.5
Min nTPM: 23.7
Sample A Female 52.5
Sample B Female 23.7
Sample C Male 36.9
Sample D Male 44.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Male 0.9
Sample B Male 0.5
Sample C Female 0.7
Sample D Female 0.4
Hippocampal formation
nTPM: 1.6
Samples: 4

Max nTPM: 2.6
Min nTPM: 0.8
Sample A Male 0.8
Sample B Male 1.3
Sample C Female 2.6
Sample D Female 1.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71529905 Antisense, RP_050915_01_C04, Mouse strain C57BL/6J (56 days, male) 0.0

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