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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
261.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 240.4
2411
Female, age 72, unknown
293.5
1870
Female, age 42, unknown
272.2
2019
Male, age 18, unknown
245.4
1833
Male, age 53, unknown
244.1
2666
Male, age 74, left hemisphere
229.7
1827
Male, age 72, unknown
227.7
1830
Male, age 51, unknown
225.8
2828
Female, age 72, unknown
225.4
2586
Male, age 75, left hemisphere
222.6
2219
Male, age 76, both hemispheres
217.5
Dorsal raphe nucleus nTPM: 235.6
2750
Male, age 76, both hemispheres
275.3
2298
Female, age 72, unknown
256.1
2047
Male, age 72, unknown
226.8
2016
Female, age 72, unknown
210.8
1828
Male, age 53, unknown
209.2
Inferior colliculus nTPM: 211.4
2097
Female, age 72, unknown
253.2
1890
Male, age 53, unknown
210.1
1848
Female, age 42, unknown
201.1
2849
Male, age 72, unknown
181.3
Median raphe nucleus nTPM: 243.0
2220
Male, age 76, midline
243.0
Periaquaductal grey, anterior nTPM: 246.4
1947
Male, age 18, unknown
263.7
2502
Female, age 75, unknown
238.8
1795
Male, age 51, unknown
236.8
Periaquaductal grey, dorsal nTPM: 195.3
2464
Female, age 72, unknown
205.2
1831
Male, age 72, unknown
202.0
2850
Male, age 76, both hemispheres
192.7
1840
Male, age 53, unknown
181.2
Periaquaductal grey, lateral nTPM: 194.9
2053
Male, age 18, unknown
215.9
2272
Male, age 74, both hemispheres
205.7
2140
Male, age 76, both hemispheres
163.1
Pretectal area nTPM: 234.6
1815
Male, age 53, unknown
284.3
2007
Male, age 72, unknown
274.3
1817
Female, age 42, unknown
262.7
1816
Male, age 51, unknown
255.5
1944
Female, age 72, unknown
237.2
2224
Female, age 72, unknown
229.0
2667
Female, age 75, unknown
219.5
2825
Male, age 18, unknown
212.2
2273
Male, age 74, both hemispheres
211.1
2316
Male, age 76, right hemisphere
199.0
2407
Male, age 75, both hemispheres
195.7
Red nucleus nTPM: 261.4
1821
Female, age 72, unknown
309.6
1904
Male, age 53, unknown
301.4
2503
Female, age 72, unknown
290.7
1954
Female, age 42, unknown
281.2
1865
Male, age 51, unknown
270.2
2785
Male, age 18, unknown
262.4
2725
Female, age 75, unknown
254.2
2823
Male, age 76, right hemisphere
247.2
2588
Male, age 74, left hemisphere
242.9
2769
Male, age 72, unknown
239.9
2227
Male, age 72, unknown
236.5
2584
Male, age 75, left hemisphere
200.4
Substantia nigra nTPM: 239.5
2241
Male, age 72, unknown
281.7
2409
Female, age 72, unknown
261.3
1889
Female, age 72, unknown
258.3
1851
Male, age 51, unknown
257.3
1916
Female, age 42, unknown
242.9
2590
Female, age 75, unknown
239.7
1941
Male, age 53, unknown
238.1
2583
Male, age 75, right hemisphere
231.3
2699
Male, age 18, unknown
201.4
2665
Male, age 74, both hemispheres
183.4
Superior colliculus nTPM: 230.5
1913
Female, age 42, unknown
261.6
2668
Female, age 75, unknown
254.4
2587
Male, age 74, left hemisphere
252.3
2261
Male, age 18, unknown
240.2
1995
Male, age 72, unknown
237.2
1895
Male, age 76, right hemisphere
221.3
1796
Male, age 53, unknown
216.5
1839
Male, age 51, unknown
216.3
2087
Female, age 72, unknown
214.0
2664
Male, age 75, both hemispheres
191.5
Ventral tegmental area nTPM: 237.4
2410
Female, age 72, unknown
278.7
1915
Female, age 42, unknown
242.1
2218
Male, age 76, both hemispheres
238.0
2223
Female, age 72, unknown
233.3
1942
Male, age 51, unknown
223.7
2021
Male, age 53, unknown
208.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
229.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 229.1
Samples: 183
Max nTPM: 382.6
Min nTPM: 110.8
Std nTPM: 47.8
Median nTPM: 223.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
382.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
378.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
377.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
369.6
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
363.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
349.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
327.0
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
324.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
323.2
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
312.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
309.8
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
308.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
302.1
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
297.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
296.8
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
295.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
292.0
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
291.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
290.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
290.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
290.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
288.6
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
286.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
283.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
283.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
283.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
281.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
280.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
277.9
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
277.3
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
274.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
271.5
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
268.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
265.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
264.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
264.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
263.6
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
263.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
262.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
262.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
262.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
259.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
259.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
258.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
257.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
257.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
252.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
251.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
251.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
251.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
250.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
249.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
247.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
246.5
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
244.6
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
243.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
243.2
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
242.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
242.2
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
241.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
241.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
241.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
240.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
240.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
240.3
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
239.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
237.4
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
235.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
234.8
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
234.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
234.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
234.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
233.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
232.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
231.6
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
230.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
230.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
230.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
227.8
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
227.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
227.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
227.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
227.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
227.1
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
226.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
226.3
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
225.8
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
225.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
225.6
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
225.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
224.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
223.9
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
222.3
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
221.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
220.8
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
220.6
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
220.3
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
219.4
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
218.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
217.8
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
217.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
217.2
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
215.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
215.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
215.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
215.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
213.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
213.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
212.8
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
211.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
211.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
211.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
210.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
210.2
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
210.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
209.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
208.8
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
208.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
208.2
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
207.6
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
206.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
206.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
206.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
206.2
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
204.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
204.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
202.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
202.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
202.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
202.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
201.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
200.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
200.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
199.0
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
198.3
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
197.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
196.8
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
196.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
196.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
195.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
193.6
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
191.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
188.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
188.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
187.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
187.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
187.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
186.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
186.2
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
186.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
184.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
182.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
182.3
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
182.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
181.9
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
181.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
181.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
180.9
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
179.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
179.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
178.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
178.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
177.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
176.5
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
176.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
172.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
172.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
171.8
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
171.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
170.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
169.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
168.1
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
167.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
166.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
165.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
164.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
164.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
159.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
153.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
151.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
149.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
146.6
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
110.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
546.4
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 520.2
Samples: 4
Max nTPM: 663.8
Min nTPM: 381.8
Sample A
Female
663.8
Sample B
Female
381.8
Sample C
Male
543.7
Sample D
Male
491.6
Midbrain nTPM: 546.4
Samples: 4
Max nTPM: 793.1
Min nTPM: 438.9
Sample A
Female
793.1
Sample B
Female
513.1
Sample C
Male
440.6
Sample D
Male
438.9
Periaqueductal gray nTPM: 401.5
Samples: 3
Max nTPM: 422.4
Min nTPM: 368.0
Sample B
Female
422.4
Sample C
Male
414.2
Sample D
Male
368.0
Superior colliculi nTPM: 491.8
Samples: 4
Max nTPM: 580.7
Min nTPM: 361.7
Sample A
Female
580.7
Sample B
Female
361.7
Sample C
Male
546.8
Sample D
Male
477.8
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
448.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 448.3
Samples: 4
Max nTPM: 456.9
Min nTPM: 439.9
Sample A
Male
452.3
Sample B
Male
439.9
Sample C
Female
444.2
Sample D
Female
456.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.