HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:146.0 nTPM
HPA Brain:378.2 nTPM
GTEx:146.0 nTPM
FANTOM5:711.6 Scaled Tags Per Million
Pig:75.1 nTPM
Mouse:86.4 nTPM
Allen mouse:2.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071177Antibody CAB015196
Glial cells MediumMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 378.2
Sample id Sample description nTPM
Hippocampus
nTPM: 378.2
2529 Female, age 94, left hemisphere 417.8
2148 Female, age 91, left hemisphere 412.7
1855 Male, age 76, left hemisphere 398.3
1898 Male, age 80, left hemisphere 370.9
1911 Female, age 85, right hemisphere 356.5
2621 Female, age 67, right hemisphere 313.2
Dentate gyrus
nTPM: 357.5
2528 Male, age 74, both hemispheres 408.9
2010 Male, age 76, both hemispheres 401.8
2246 Female, age 85, both hemispheres 361.4
2530 Female, age 94, left hemisphere 345.5
1927 Female, age 91, both hemispheres 315.0
2531 Female, age 67, both hemispheres 312.3
Entorhinal gyrus
nTPM: 257.4
2117 Female, age 91, right hemisphere 374.7
2686 Male, age 75, right hemisphere 274.3
1938 Female, age 85, left hemisphere 265.5
1787 Male, age 76, left hemisphere 263.3
2764 Male, age 80, right hemisphere 205.9
2613 Female, age 94, left hemisphere 160.6
Hippocampus, CA1
nTPM: 336.3
1873 Female, age 85, both hemispheres 395.4
2527 Male, age 74, both hemispheres 387.9
2082 Female, age 91, right hemisphere 333.3
2045 Male, age 76, both hemispheres 311.5
2749 Male, age 80, left hemisphere 253.2
Hippocampus, CA2
nTPM: 314.3
2113 Female, age 91, right hemisphere 371.1
2249 Male, age 74, both hemispheres 366.9
1940 Female, age 85, left hemisphere 342.2
2437 Female, age 94, left hemisphere 307.8
1963 Male, age 80, left hemisphere 258.6
1892 Male, age 76, both hemispheres 239.2
Hippocampus, CA3
nTPM: 308.2
1891 Female, age 85, both hemispheres 354.0
2620 Female, age 94, left hemisphere 335.1
2861 Female, age 67, both hemispheres 333.1
2436 Male, age 74, both hemispheres 289.7
1867 Male, age 76, both hemispheres 269.1
2137 Male, age 80, left hemisphere 268.0
Parahippocampal cortex
nTPM: 263.1
2250 Female, age 67, right hemisphere 326.0
2692 Male, age 74, both hemispheres 305.4
2018 Male, age 76, both hemispheres 278.3
2245 Female, age 91, both hemispheres 277.2
1933 Female, age 85, both hemispheres 258.0
1850 Male, age 80, both hemispheres 256.7
2622 Female, age 67, right hemisphere 255.8
1990 Female, age 91, right hemisphere 253.4
2693 Female, age 94, both hemispheres 220.7
2532 Female, age 72, left hemisphere 199.0
Perirhinal gyrus
nTPM: 243.7
1841 Female, age 85, right hemisphere 265.6
1794 Male, age 80, right hemisphere 255.6
2521 Female, age 94, right hemisphere 253.5
1847 Female, age 91, left hemisphere 248.3
2848 Male, age 76, right hemisphere 195.4
Subiculum
nTPM: 322.8
2729 Female, age 91, right hemisphere 444.5
2042 Male, age 76, both hemispheres 349.4
2619 Male, age 74, both hemispheres 335.4
1901 Male, age 80, both hemispheres 273.0
1977 Female, age 85, both hemispheres 271.8
2438 Female, age 94, left hemisphere 262.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 146.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.0
Samples: 255

Max nTPM: 463.2
Min nTPM: 50.5
Std nTPM: 70.4
Median nTPM: 128.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 463.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 445.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 443.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 392.2
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 369.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 346.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 341.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 340.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 314.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 311.9
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 305.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 711.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 711.6
FF:10153-102I9 76 years, female 768.9
FF:10169-103B7 60 years, female 654.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 75.1
Pig sample Sample description nTPM
Subiculum
nTPM: 69.5
Samples: 4

Max nTPM: 74.7
Min nTPM: 65.5
Sample A Female 68.7
Sample B Female 74.7
Sample C Male 65.5
Sample D Male 69.0
Dorsal hippocampus
nTPM: 72.3
Samples: 4

Max nTPM: 78.8
Min nTPM: 66.6
Sample A Female 66.6
Sample B Female 72.9
Sample C Male 71.0
Sample D Male 78.8
Entorhinal cortex
nTPM: 75.1
Samples: 4

Max nTPM: 79.0
Min nTPM: 71.4
Sample A Female 71.4
Sample B Female 73.0
Sample C Male 79.0
Sample D Male 76.9
Ventral hippocampus
nTPM: 67.9
Samples: 4

Max nTPM: 76.4
Min nTPM: 57.8
Sample A Female 57.8
Sample B Female 76.4
Sample C Male 65.1
Sample D Male 72.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 86.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 83.0
Samples: 4

Max nTPM: 92.5
Min nTPM: 75.9
Sample A Male 84.2
Sample B Male 92.5
Sample C Female 79.5
Sample D Female 75.9
Hippocampal formation
nTPM: 86.4
Samples: 4

Max nTPM: 90.8
Min nTPM: 81.1
Sample A Male 86.6
Sample B Male 90.8
Sample C Female 87.2
Sample D Female 81.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
77413704 Antisense, RP_070205_01_E07, Mouse strain C57BL/6J (56 days, male) 5.7
70919167 Antisense, RP_050712_04_C11, Mouse strain C57BL/6J (56 days, male) 0.0

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