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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
91.5
nTPM
GTEx:
91.5
nTPM
FANTOM5:
55.9
Scaled Tags Per Million
Pig:
33.1
nTPM
Mouse:
80.5
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
91.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 91.5
Samples: 105
Max nTPM: 224.4
Min nTPM: 33.2
Std nTPM: 31.7
Median nTPM: 0.0
490_1
67 years, female
224.4
415_1
77 years, female
174.7
414_1
84 years, female
165.8
162_1
79 years, female
144.8
466_1
57 years, female
144.4
117_1
61 years, male
141.9
347_1
72 years, male
139.6
518_1
75 years, female
138.0
35_1
74 years, female
136.7
237_1
82 years, male
136.5
32_1
67 years, male
133.1
43_1
64 years, female
132.8
405_1
91 years, male
131.3
217_1
76 years, male
130.6
526_1
61 years, male
128.0
246_1
77 years, male
124.6
6_1
73 years, female
124.5
149_1
88 years, male
123.8
42_1
85 years, male
121.3
81_1
67 years, male
119.9
468_1
89 years, male
114.4
425_1
59 years, female
114.0
229_1
69 years, female
113.6
137_1
83 years, male
113.5
266_1
85 years, male
112.8
377_1
82 years, female
109.3
126_1
63 years, male
109.2
313_1
79 years, female
107.9
354_1
81 years, female
106.9
386_1
76 years, male
106.7
142_1
61 years, female
105.7
375_1
74 years, female
105.6
324_1
76 years, male
102.3
115_1
83 years, male
102.1
335_1
73 years, female
100.6
413_1
59 years, female
100.6
251_1
78 years, male
100.5
265_1
87 years, male
100.4
109_1
81 years, female
97.4
389_1
86 years, female
97.0
172_1
72 years, female
95.8
9_1
66 years, female
95.4
18_1
88 years, male
95.1
307_1
66 years, female
94.5
99_1
64 years, male
92.8
243_1
75 years, male
92.0
218_1
71 years, female
91.6
499_1
55 years, female
91.3
503_1
68 years, male
90.2
315_1
62 years, female
89.1
163_1
78 years, male
89.0
316_1
62 years, male
87.5
491_1
89 years, female
87.0
254_1
77 years, female
86.9
406_1
79 years, male
86.3
189_1
76 years, male
85.9
292_1
71 years, male
83.4
319_1
81 years, male
83.0
153_1
70 years, female
82.6
355_1
70 years, female
82.5
352_1
62 years, male
81.4
376_1
75 years, female
79.4
318_1
68 years, male
79.3
288_1
66 years, female
77.3
145_1
84 years, male
77.1
394_1
75 years, female
76.4
286_1
68 years, female
76.3
447_1
81 years, male
76.3
495_1
57 years, female
75.7
120_1
70 years, female
75.5
351_1
91 years, male
74.2
17_1
71 years, male
74.1
379_1
60 years, male
74.0
349_1
83 years, male
73.9
396_1
62 years, male
73.5
320_1
89 years, female
71.1
517_1
88 years, male
70.4
293_1
68 years, female
69.5
348_1
84 years, male
68.5
173_1
67 years, male
67.7
480_1
63 years, male
67.3
119_1
70 years, female
66.8
356_1
87 years, female
66.7
350_1
84 years, female
66.6
404_1
82 years, female
65.8
291_1
76 years, male
65.7
2_1
77 years, female
65.5
4_1
88 years, female
63.7
264_1
73 years, female
63.2
89_1
63 years, male
62.9
501_1
88 years, male
61.1
177_1
74 years, male
59.3
311_1
78 years, male
58.6
139_1
64 years, female
56.0
384_1
83 years, male
55.1
353_1
82 years, female
54.3
322_1
76 years, male
53.5
321_1
62 years, female
47.6
452_1
88 years, female
46.3
308_1
70 years, female
45.4
314_1
67 years, male
45.2
317_1
60 years, male
44.1
506_1
65 years, male
43.5
295_1
61 years, female
34.2
41_1
94 years, female
33.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.