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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:680.8 nTPM
HPA Brain:1313.1 nTPM
GTEx:680.8 nTPM
Pig:376.8 nTPM
Mouse:634.5 nTPM
Allen mouse:26.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1313.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1096.7
1961 Female, age 42, unknown 1378.5
2226 Male, age 75, left hemisphere 814.9
Dorsomedial nucleus
nTPM: 1143.1
2017 Female, age 42, unknown 1213.0
1989 Male, age 62, unknown 1174.2
2041 Female, age 72, unknown 1042.2
Lateral hypothalamic area
nTPM: 797.1
1791 Male, age 80, right hemisphere 1118.5
2412 Male, age 62, unknown 797.6
2271 Male, age 75, both hemispheres 685.5
2228 Male, age 66, unknown 587.0
Mammillary body
nTPM: 939.1
2413 Male, age 66, unknown 1065.0
1834 Female, age 42, unknown 1038.2
1923 Female, age 72, unknown 1002.8
1945 Male, age 80, right hemisphere 864.8
1948 Female, age 72, unknown 724.5
Paraventricular nucleus
nTPM: 891.9
2700 Male, age 62, unknown 891.9
Preoptic area
nTPM: 1040.7
1861 Female, age 42, unknown 1361.9
1907 Male, age 80, right hemisphere 983.5
2414 Female, age 72, unknown 776.6
Supraoptic nucleus
nTPM: 1142.3
1894 Female, age 72, unknown 1234.1
2835 Female, age 72, unknown 1110.2
2043 Male, age 62, unknown 1082.7
Ventromedial nucleus
nTPM: 1313.1
1822 Female, age 42, unknown 1393.1
1982 Female, age 72, unknown 1233.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

680.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 680.8
Samples: 257

Max nTPM: 1764.8
Min nTPM: 154.2
Std nTPM: 259.7
Median nTPM: 646.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1764.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1680.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1470.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1450.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1335.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1327.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1253.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1242.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1237.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1236.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1209.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1133.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1096.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1089.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1078.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1072.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1071.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1062.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1062.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1046.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1038.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1033.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1023.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1023.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1023.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1010.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1003.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 997.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 989.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 981.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 970.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 963.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 960.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 950.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 943.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 943.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 934.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 933.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 930.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 924.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 921.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 914.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 913.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 908.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 908.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 905.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 905.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 904.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 895.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 892.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 889.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 887.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 882.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 878.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 874.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 857.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 848.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 839.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 838.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 831.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 829.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 829.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 828.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 826.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 825.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 825.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 822.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 822.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 821.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 820.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 819.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 817.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 816.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 815.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 813.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 808.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 806.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 803.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 801.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 798.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 797.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 796.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 791.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 790.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 786.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 784.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 782.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 780.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 777.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 776.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 773.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 772.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 771.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 766.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 765.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 757.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 754.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 751.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 744.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 744.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 744.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 742.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 738.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 737.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 735.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 725.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 724.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 713.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 705.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 703.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 692.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 687.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 687.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 685.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 684.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 678.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 677.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 667.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 666.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 665.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 664.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 661.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 660.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 659.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 651.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 651.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 648.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 647.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 646.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 637.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 628.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 626.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 623.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 623.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 622.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 621.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 621.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 620.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 620.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 619.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 619.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 617.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 617.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 610.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 605.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 601.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 601.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 600.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 598.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 590.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 589.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 587.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 578.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 575.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 571.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 569.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 562.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 561.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 559.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 558.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 557.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 554.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 553.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 549.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 547.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 546.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 546.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 545.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 544.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 540.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 540.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 537.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 533.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 532.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 531.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 531.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 529.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 528.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 525.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 524.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 523.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 523.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 522.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 521.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 518.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 516.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 510.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 508.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 508.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 504.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 503.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 503.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 502.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 502.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 501.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 498.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 495.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 491.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 490.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 486.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 486.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 486.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 478.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 475.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 469.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 460.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 456.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 455.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 453.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 450.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 450.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 446.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 446.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 439.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 438.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 436.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 433.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 429.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 422.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 422.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 422.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 422.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 419.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 416.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 412.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 410.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 405.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 397.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 396.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 388.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 384.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 378.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 368.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 364.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 363.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 359.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 358.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 352.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 351.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 348.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 346.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 346.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 337.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 332.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 316.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 312.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 310.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 301.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 275.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 257.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 255.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 236.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 231.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 216.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 214.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 208.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 154.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

376.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 376.8
Samples: 4

Max nTPM: 448.6
Min nTPM: 330.9
Sample A Female 448.6
Sample B Female 349.2
Sample C Male 378.6
Sample D Male 330.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

634.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 634.5
Samples: 4

Max nTPM: 720.2
Min nTPM: 573.2
Sample A Male 637.0
Sample B Male 720.2
Sample C Female 573.2
Sample D Female 607.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 26.7
67936207 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 30.4
68196976 Antisense, RP_040928_01_A06, Mouse strain C57BL/6J (56 days, male) 27.3
77414652 Antisense, RP_070205_01_H10, Mouse strain C57BL/6J (56 days, male) 22.9

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